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GT17853

CSHL Arabidopsis genetrap mutant lines

Original: GT17853

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17853

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2337602 [Map]; Strand: c
      • AT3G07330.1 - [+] show detail - Cellulose-synthase-like C6
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT17853 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAGGTAT 
    AACCACTTTC TAAAGCCAAC TGGTCACCTA ACATTCTCCT ATGAACATGA 
    GACAAAAAGA CATGATTGTT TACCTTAAAA TGAGGCACAG TTTTCTTCAA 
    GAAATCCGCA GGTGGCTGGA AATCTGCATC AAATATGGCG ACAAACTCGT 
    AGTCTTTGAC ATATTCACAG TTCTCCTTCA CTCGACCAGA NNCCAGNCTT 
    GTAACCAGTA CGTATGAGAC GATGTCTATA CACTATCCGG ACACCCCTTT 
    GTTGCCATTT TTGTACTTCC GCTTTTATAA GCTGCTGAAC ATCCAATTCA 
    CTGGAGTCAT CAAGAACCTG AACTAGCATT CTTTCCCTTG GCCAGTCAAG 
    CATACACACA GGTCCAGTAG ATTGTTGGTA AACCTGCAAG TGCCACAAAC 
    CAAAATCAAC GAGATGAGAT AACAGAACCG GAACTGCAAG GATTTTAATA 
    CGAATAAGCA GGCAGATCAA AGTAAACATA TTTAAAACTA TCAATAAGTT 
    TCAGATATGA AACCGCATAA GAAACACTTA GAGATTACGA GTCAACATAG 
    CAACAAATCC TACCTAGAGA TGCTTGATTC CCGAATCAAC TTCAAACAGC 
    TAGATACAAC TAAGGATTAG AGACCTACAT ACATGTTCTT ACC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2337799 [Map]; Strand: c
      • AT3G07330.1 - [+] show detail - Cellulose-synthase-like C6
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT17853 - 5-prime edge 
    CCTACTTTCT CCCTGGTTAT ACCCTGAGCT TAATGGTATT CGGTTAGAAG 
    TTGGCAGTGG GAAAAATGAC ATATATGGCA TAGCGTGTCT TCCACTACAT 
    ATGTGTGTCT TGATTGCAGT GGTTCTAATG TTCTATGATG AAAATCTGGC 
    ACGGCAATGG AGAGAATTTA CTTCTGTAAA AATTATATAT TTTAGTCAAC 
    ACCAGCTTGG TAGAACCTTC CCCAAAACCC ATGTTATCAA ATTGTCACAG 
    CCTTGGGACA ACCATTGACA CCAGTCAAAT ATTTCATCTC TCTCTGCAAG 
    TATAAGTTTT GCTCACATCA TGATTTCGTT GTATTGACCT TTCACATGGT 
    ATGAAGTATG AACCTGTGTA ATCTACTGTG CTTAGATTTC TTGCTTTTTT 
    AGTCGAAGGT CTATACTGAG AACAGTGATA CAATATGCTT GCCACACTAG 
    CCTATCTCAC CCGACAGTTT CTGTGTTTTT TTCAGGGTAA TGAAGAATTA 
    GCCTTGGTCC AAACACGGTG GGCTTTTGTG AACAAAGACG AAAACTTGCT 
    TACAAGACTC CAGAACATAA ATTTGTCTTT CCACTTTGAA GTTGAACAGC 
    AGGTCAATGG TGTTTTTATT AACTTCTTTG GCTTTAATGG AACTGCTGGT 
    GTTTGGAGAA TCAAAGCCCT CGAGGATTGC GGGGGATGGT TGGAGCGAAC 
    AACTGTTGAG GACATGGATA TTGCCGTTCG TGCGCATCTT TGTGG

AT3G07330.1

Model type
Protein coding
Short Description
Cellulose-synthase-like C6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
Cellulose-synthase-like C6 (CSLC6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen tube development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 4986 Blast hits to 4983 proteins in 1463 species: Archae - 182; Bacteria - 3875; Metazoa - 9; Fungi - 97; Plants - 510; Viruses - 14; Other Eukaryotes - 299 (source: NCBI BLink).
Link
InterPro Scan - TAIR