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GT17865

CSHL Arabidopsis genetrap mutant lines

Original: GT17865

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17865

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 13467646 [Map]; Strand: c
      • AT5G35205.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT17865 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTATG 
    TGAGACTAAA AATCACCGAG ATTATTAGTT GTAGACGCCC AGCAAAGGAG 
    AGAGCTTTAA CCGTCCAAGA GTTTATTTGT GATCTGATTT TTTCTATTAA 
    TGGTAGATAA TCTGAAGCTG TCATCCGTCT CGTAAGTAAA GGGAGACCCA 
    AGTATCTCAC CGGTAGGGCT CCATATTCAA AAGGAAACTG TTGGAGTATC 
    TCTTCCTTTT GGATATCTGG AACACCTGCC ATATAGATAG TGGACTTCTC 
    GAGACTAATC TTTAAACCCG AGTGCGTTGC AAAGTCGTCA AAGACCTCTA 
    ATGTGCCTTC AATTGATTTC TTATCCCCTC TCACAAACAC CATCAAATCA 
    TCAGCAAAAC AAAGGTGTGT AAGTTTCAGC AACTTACAAT TCGGGTGGTA 
    GATTATGTGT TTGTCCTCAG CCGCTTTGTC TATCTTGCGG GATAACACGT 
    TCATGCATAT AACAAATAGA TATGAACTTA GTGAACAGCC TTGCCTGAGT 
    CCTCTTTCGC TTCCAAAATA TTCGGCTAGC TCTCCATTAA CTTGCAATGA 
    AAAAGAGGCT GTTGTTACAA AGGTCTGAAT CCAATGAATA TACTTCTCCG 
    GGATGTCTAG AGCTTTCAGC GTATTGAGCA AAAAACTCCA TTGGACTGAA 
    TCAAAGGCTT TAAATATATC AATA

AT5G35205.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.1e-36 P-value blast match to GB:BAA20419 reverse transcriptase (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR