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Mutant Lines
GT17896

GT17896

CSHL Arabidopsis genetrap mutant lines

Original: GT17896

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17896

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 13870 [Map]; Strand: w
- AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
  Distance: -511; Region: promoter
- AT4G00030.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
  Distance: 0; Region: exon1 (CDS)
- AT4G00040.1 - [+] show detail - Chalcone and stilbene synthase family protein
  Distance: -757; Region: promoter

AACGGTAGAG GTTTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTACTTT 
TCTATGATGA ACAACTGTTC CTTCTCCGTC GTCCACAAGA GCCGCCACGT 
AGCAGATAGA GAGTCGTCTG TGGTGATGGA GCTGCGCCCG ATAACCGTCA 
TGGATTCGAT GGCGTTCACG ATTTCATCTC GCTTCTTGGG GTCTTTCTGG 
GTTCTCAGAC CTCGATCCTC CTCGGAGATC AGCTCAAGCA GCTTCCTCTT 
GGCTCGCTGT GCTGGATTCG CGAAGATCGA GCAGCTTGTT CGAAAACCGG 
CACGACGAGT GCGGCGGAGT GGAGGAGAAC ATGCCGACAG CGAGAGCGCG 
AGCGCCATGT TTGCAAATTG CAATTTCCAT GGTTAGGTTG TTGCACGAAG 
AAGAAGAAGA GATACTCTGT TATTTGGGTT TCTTTTCTAA AAAGCCCATT 
TGGGTTTTAT TTGCTTATCT CCCATGAGAC TAAGCCCAAG CCCAAGGAAA 
TAGCTTGCAC GTGCGCGTCA CGTGTCTACG ATAAAACCCC AGCAACGGCG 
AGCGGCTTTG CCTTGCTCAT TCAACCTCGC TCGTCGTCGT CGTCGTCTCC 
ACTTCGATTT TTCAATCAGT AATATTGGTG GTTCAGAGAT GATGATGATG 
AATCTTTTAA GGAGATCAGC GATAGCCATC GGCCGCCAAT CAAAATCGAA 
ACTGGCGTCG TTTTCCTCCG CTACACAACC TTGTTCCGGA ATCCCAAAAT 
CG

AT4G00026.1

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00030.1

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00040.1

Model type: Protein coding
Short Description: Chalcone and stilbene synthase family protein
Computational Description: Chalcone and stilbene synthase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: phenylpropanoid biosynthetic process, biosynthetic process, metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Thiolase-like, subgroup (InterPro:IPR016038), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT1G02050.1); Has 5683 Blast hits to 5679 proteins in 1391 species: Archae - 0; Bacteria - 1882; Metazoa - 0; Fungi - 67; Plants - 3528; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).
Link: InterPro Scan - TAIR