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GT17918

CSHL Arabidopsis genetrap mutant lines

Original: GT17918

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17918

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2919819 [Map]; Strand: w
      • AT3G09505.1 - [+] show detail - pre-tRNA
        Distance: -1333; Region: intergenic
      • AT3G09510.1 - [+] show detail - Ribonuclease H-like superfamily protein
        Distance: -1985; Region: intergenic
    Flanking Genome Sequence: GT17918 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTACCTGACA TAGTAGAGCT 
    ATTTTATTTA CAAAATAGAC TATTTTTTTT TTGGTTTAAC CGGAAACCGA 
    AAAATAATTT TAAACCCTTT TTTTTCCCAA AAAGGGGTCC CCCAAAAATG 
    GGTTAAACCA AAAAAAATTT CCGGCTTTTG GTTGGTTGGC CCCGCCCAGG 
    GGGCCAAAAA ACCCCCAGGG AGTTTCCTTA CCCTAAAAAA AATTGGGCCC 
    CCAATTTTGG GGGTGGGAAA AAACAAAAAA ATCCGGGGTA AAATTTTTGG 
    ACCTTCAACC CAATCCAAAC CCTTATCCGG CCTATATATT TGGACCAAAA 
    TGATTTGCCG AACCAACCCT TAAGGGGGAC CGGCAATTAA AACCAGGGGA 
    AAAAAGAAAA TCCTTTTTTC CACCCACCAG GGCGCCGAAA ATTTTTACCC 
    CTGAAACCTT TTGGGGGCAA TTCCCCAGGC GGCCCTTGAA TGGGGGGGTG 
    CCCTTGAACT TTTACCAAAA CCTCCCAAAA AGGTTACCGG GGGTCCTTGA 
    AGGTTGGGCC CGCCCCCGAA CTTTTGGGGG CCCCATCCTG GCCCCCCCCC 
    AAAGCCCCCC CTTTTGAAAA GGGGACCAAG CCATTATTAA AAAATTTTTT 
    CCAATTGGAA TTCCCATTAA A

AT3G09505.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Arg (anticodon: TCG)
Link
InterPro Scan - TAIR

AT3G09510.1

Model type
Protein coding
Short Description
Ribonuclease H-like superfamily protein
Computational Description
Ribonuclease H-like superfamily protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1); Has 1469 Blast hits to 1446 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1468; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR