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GT17950

CSHL Arabidopsis genetrap mutant lines

Original: GT17950

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17950

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24678036 [Map]; Strand: c
      • AT1G66230.1 - [+] show detail - myb domain protein 20
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT17950 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TACGTCCACA 
    TCTTCGCATT CTTCTAATGA TTCGAGTTTC TTGAAGGGCT TGCAGTTCCC 
    GGATTTCGAG TGGTCCGACT ATGGTAATAG TAATAATGAT AATAACAATG 
    GTGTGGACAA CATTATAGAG AACAATATGA TGAGCCTGTG GGAAATTAAT 
    GACTTTAGCA GTTTGGATTT GCTGCTTAAT GATGAGAGTT CTTCCACTTT 
    TGGGTTGTTT TGAATTCATT CTTAAGAATA TGGTTTCTTT TGTAAAAGAA 
    TGGAAACTAT GGGGTGGGGG AAACAGAAAA ACCTAAATAC CCTTCGTTAC 
    TCTAGTTTTT GAGGGATTTG AGAGAACGTT TTTTTACTTG TGAGAAATTT 
    AGAAACAAAA ATAAAGTTTA TTTATTTTGT ACAGACAAAA AAGAGTTAAG 
    AGAGAAATGT GTCTTTGGTC CATTTCTTTT TTTGCTTTGT ATACTGGGTT 
    CCATACTTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24677978 [Map]; Strand: c
      • AT1G66230.1 - [+] show detail - myb domain protein 20
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT17950 - 5-prime edge 
    TCCTACTTTC TCCCTGTGTG GACGTGGATG AAGACATTGT TGAATTGCTG 
    CAGATAAGGT CTAAAGACTC TGTTTCAATA AGAGGGACAT CTTCGACACC 
    ATACTCAAGA TTTATCTCCA TGAATTGATC ATCACCTAAC GACTCTTCAA 
    GTCTTGATAT GTTCTTGATG TTGTTCTCTA AAGGACGCTC CATTGTTTCT 
    TGAAAAGGAA CTGTATTATT CTGTAGCTTC TTTAAGGGTT CTTC

AT1G66230.1

Model type
Protein coding
Short Description
myb domain protein 20
Curator Summary
Encodes a putative transcription factor (MYB20).
Computational Description
myb domain protein 20 (MYB20); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 43 (TAIR:AT5G16600.1); Has 8410 Blast hits to 7811 proteins in 453 species: Archae - 0; Bacteria - 0; Metazoa - 663; Fungi - 296; Plants - 5767; Viruses - 4; Other Eukaryotes - 1680 (source: NCBI BLink).
Link
InterPro Scan - TAIR