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GT18019

CSHL Arabidopsis genetrap mutant lines

Original: GT18019

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT18019

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 138455 [Map]; Strand: c
      • AT1G01355.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
        Distance: -58; Region: promoter
    Flanking Genome Sequence: GT18019 - 5-prime edge 
    TTCCATCCTA CTTTCTCTCC TCGACGAGGA AATCTAGAAG ATCGGAAAGC 
    CAGAGAGAAA AAAAGAGATG AGAACATTTC GATCGAACCT TGTACGACAA 
    ATAATTACCT GATCAGATGC GTTTTCTACC CCATAGAACT ACCTTGTTAC 
    CCCTACTTGT GG

AT1G01355.1

Model type
Protein coding
Short Description
Putative endonuclease or glycosyl hydrolase
Computational Description
Putative endonuclease or glycosyl hydrolase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT5G35640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR