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GT18073

CSHL Arabidopsis genetrap mutant lines

Original: GT18073

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18073

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 423513 [Map]; Strand: c
      • AT5G02140.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT18073 - 3-prime edge 
    CGATAATTTA TGAAATGGGT TTTGTTTCTC CTTTTGATTC CTCTCAATAA 
    TAGTGACTTT GCTCTTTTGC AGATGGAGCT CAGCTTATAA TAGTGAATAA 
    CTGCCAGGAG AGCATTTGGC CGGGAATTCT CGGCGGCGGA GGCCAAATCA 
    CACCAAGAAA CGGCGGATTC CACATGGGAA GCGGCGAAGA AACCATCATA 
    GACGTACCGG ATAAATGGTC CGGTCGAATC TGGGGTA

AT5G02140.1

Model type
Protein coding
Short Description
Pathogenesis-related thaumatin superfamily protein
Computational Description
Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G18250.2); Has 1588 Blast hits to 1558 proteins in 178 species: Archae - 0; Bacteria - 37; Metazoa - 56; Fungi - 96; Plants - 1388; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR