1. Home
  2. Mutant Lines
  3. GT18086

GT18086

CSHL Arabidopsis genetrap mutant lines

Original: GT18086

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18086

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23356144 [Map]; Strand: w
      • AT5G57660.1 - [+] show detail - CONSTANS-like 5
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18086 - 5-prime edge 
    GCATGAAGGT TCTTCTGACT TTATGTTTTC TGATTTCGAT CGGCTTATTG 
    ATTTCGAGTT TCCGAATTCG TTCAATCATC ATCAAAACAA CGCCGGAGGA 
    GATAGTCTTG TTCCGGTTCA GACGAAAACA GAGCCTCTCC CGTTAACTAA 
    CAATGATCAT TGCTTCGATA T

AT5G57660.1

Model type
Protein coding
Short Description
CONSTANS-like 5
Computational Description
CONSTANS-like 5 (COL5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 4 (TAIR:AT5G24930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR