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GT18103

CSHL Arabidopsis genetrap mutant lines

Original: GT18103

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT18103

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 16768217 [Map]; Strand: w
      • AT5G41900.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: -736; Region: promoter
    Flanking Genome Sequence: GT18103 - 5-prime edge 
    CCTACTTTCT CCCTAATCTA CCAAAGCATT ATATCAAAAT CCGAATAACA 
    CAAGTAACAC TGTAACGTTC AAACCAAATT TGGTTTGTGT CTAGTAGTTA 
    ATTTAAAAAA AAAAATTTTT CAAAGCTTAT TTCAAACAAA CGTTTCCCTT 
    GAGGTACAAA CAAAAAGGTT TTTTTAATTT AATTTAATAT TAGATCCAAA 
    AAAAAAAAAA AAAAAACCTT CCCAATCCCC AAAAAAATTG GCTTGGAAAT 
    TTCCCCCTGG TTTTCCCCAA ACCCAAGCCC CGGGGGGGTT TCCAATTTAA 
    GGGGTAAAGG GCCCCCCGGG GCTTCCGGGG CCTTAACCAC CCGGGGACCT 
    GGTTGTTTTC CTCCCCTGGG CCCAATTTCC CCCATCCCCC CAAAAAAAAC 
    CCCGGGGGGA AAACCCCCAA ATTTTCCCTG GAATGGAAAA CCTTTTAAAA 
    GGGCCTTTTT TTTTCCAGGG AAAACGGACC TGGTTTTCCA ACCTTTGGAA 
    ATTGGAAAAA AAATTTTTCC TTGGGACCAA ATTTTAAACC TGGAAGGCCT 
    TGGAATTGCC CAATTGGGCC CTTTAAAGCC TTCCAACCAA AAATTAAATT 
    GGGCCCTTCC CAACCTTAAA CCTTTTTTGA AAAAGTTTTA TTTAAATT

AT5G41900.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G64670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR