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GT18138

CSHL Arabidopsis genetrap mutant lines

Original: GT18138

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18138

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4655306 [Map]; Strand: w
      • AT3G14050.1 - [+] show detail - RELA/SPOT homolog 2
        Distance: -1392; Region: intergenic
      • AT3G14060.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 1740; Region: intergenic
    Flanking Genome Sequence: GT18138 - 5-prime edge 
    CTTTCTCCCT CTCTCGTACT TGGATATTTT TTGCATCAAT AAGAGGAATC 
    TGAATCGAAC CCACATTGCT GGCTTGGTTA ATAACTCTTC GAAGCCGTCT 
    ACTCAAATAG TATTAGCTTG ATGATACTAA TAAAGGGTGA TAAAGTTTAT 
    ATCTACAAAG GTAAATATAA ATCTATTTAT AAATAGCATG GAATCGATAT 
    GCAATTTGAG ACTCGGTTGA TTACTAGATT ATTCAACAGA AAAAAAGAAA 
    ACTACATGTA TAGTGAAATC AATTCCTTCA AATGGAACTA ACACAGTCAA 
    ACATGATTGG TTTATTGAGG AAAAAAAAGA TGGATGGTTA ATGATATCAA 
    GGCAAGGGCA ACAGTGACAT TTTGATGCAT TGATGTTGGA TTCATAAAAC 
    CCTTCAAATA TATTGTAAGT TAATATGCCC GATAGTCTAG AAGATAGGAA 
    GGGAGTGTTG ATAAGGACAC ACCGACGCGT TCCGGAGAAA AACTTTAGAA 
    AGAAGAATTG AACTTGACAC GCGTCTAATT TGGCGGCCAT TAGAAAAAAA 
    ATGGGTGTCA CGCTCATATC ACGTGTCCAT ACCCTAGCAT CAACTCCATG 
    ACTTGTGGGG ATCACGGTGT CTTTTTAAAC ATCAAACGGC TACGGTTGAG 
    TCTTCTTCGG CTTGAACTCA GTTACAGCCG TAAATCTACT TCTACGGTTG 
    TTGATAGTCA GCTGGTCAAA GTCTGATACA TTCTGTATCA CGTGCGTCAC

AT3G14050.1

Model type
Protein coding
Short Description
RELA/SPOT homolog 2
Computational Description
RELA/SPOT homolog 2 (RSH2); CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 12447 Blast hits to 12322 proteins in 2456 species: Archae - 4; Bacteria - 8610; Metazoa - 164; Fungi - 55; Plants - 218; Viruses - 2; Other Eukaryotes - 3394 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G14060.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR