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GT18162

CSHL Arabidopsis genetrap mutant lines

Original: GT18162

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18162

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 104024 [Map]; Strand: c
      • AT4G00238.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT18162 - 3-prime edge 
    AATTAGAGTA GATAGAAAGA TGAAGCCTAA GATAGATAAC AAAATAAGGC 
    ATTACATCTT CATTAAACCC GAGATTAAAC GGATAAACAT ATACAATCCA 
    ATAGCTTCCT CTTCTTCTTC TTAGTTGGTT TGAGTAAGCA CTGAAGTCAC 
    CTCCTTCAAA ACATCCATGT TCGCCAACAA CAACTCACAT TTCTTAGCAT 
    CCACAAGCTT CATCTTCTCT TGAATCCTCT TCTTAGTCTC CACGGACACC 
    TTGCTCCACT TCTTCTTCAC AGAATACTCA TCCAAACCGA GACTAGCGAT 
    AACCGGAACA AGAAAAGACT CCTCAAACCA CTCCGAATCT TCTCCAAGAA 
    TCACGACTTG CTCATCTTCT TTAACCAAAG GTTTCACGTT CTTCTCCTTG 
    CTATAAGCCT TAACAAGAAC AGATTCATCT TTCACTTTCT TCTTCACA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 103924 [Map]; Strand: c
      • AT4G00238.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT18162 - 5-prime edge 
    CCTACTTTCT CCCTGACTCT AATGAACTTT TAGGACTTTG GATTCTCGTG 
    TGAGAATTAG CTTTGTCTAA CAAGCCTTTT GGTCGATGGT TGTAATGAAT 
    TAGCTAAGTT GTCTAACTAG CCTTTTGGTC TATGGTTATA ATGAACTTTT 
    AAGACTTTGT AAATGTGCTT CTTATATGAA TGTCTCTCTA CTCGTAACCA 
    GAGTTATTAC AAAACAAAGA AACACACAAC AGAATGTGGG AGATTGTTAG 
    CTATCATACC AATTGAATTT TTACATGTTG TGGTTACTAC TAACTACTGT 
    CCCAATTT

AT4G00238.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00250.1); Has 934 Blast hits to 678 proteins in 131 species: Archae - 0; Bacteria - 25; Metazoa - 209; Fungi - 135; Plants - 261; Viruses - 3; Other Eukaryotes - 301 (source: NCBI BLink).
Link
InterPro Scan - TAIR