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GT18197

CSHL Arabidopsis genetrap mutant lines

Original: GT18197

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18197

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2983970 [Map]; Strand: w
      • AT5G09620.1 - [+] show detail - Octicosapeptide/Phox/Bem1p family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18197 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAAATGGGG 
    TTACAGGAAC CTTATTCACA GATGGGGAAG CCTGTGTACT ATACGGTGGC 
    TGGAGAAGGC ATGATGGTTC AACCGCCACC AGCCCAGCCT CAGCAGCAGC 
    AGCAGCAGTA CCAGGGAATG GGTCAACCGG TTAGTGGCAT GACCGATCTC 
    AGAACCGGAC CGGATGGGAA AGTGGCGGTT AACATGGCTG CACCACAAGT 
    TTCAGATTCG GTGTGAGTGT GAGATTGAGT TAACATTGAG GTTAATGTTA 
    TGATTATCCA TTTCTTTAAA CTTTATGATA TATGTGTAAA AGTGTTTTTT 
    TAGATCAAAC TAGGAATCTG GATTTCTGAT GAATCAATTG AAGCACTTTT 
    GATGTTTTTA TTTTATTTTA TTTTGGTAAA CTTCTTTCAG AGTTCTGTTT 
    TTTTAACTTT TGAAGTATGC TTTTGGACCT TTTCGTCTCC TGTCTATTGT 
    TATGCATCTA TTTAGTGGTG TATAAAGAAT ATTATCCAAT TTCATATGCA 
    TTAAAAGAGT TACGTTTATG TAT

AT5G09620.1

Model type
Protein coding
Short Description
Octicosapeptide/Phox/Bem1p family protein
Computational Description
Octicosapeptide/Phox/Bem1p family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT5G64430.1); Has 18668 Blast hits to 11149 proteins in 562 species: Archae - 0; Bacteria - 597; Metazoa - 7421; Fungi - 2059; Plants - 1927; Viruses - 138; Other Eukaryotes - 6526 (source: NCBI BLink).
Link
InterPro Scan - TAIR