1. Home
  2. Mutant Lines
  3. GT18261

GT18261

CSHL Arabidopsis genetrap mutant lines

Original: GT18261

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT18261

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT18261 - 3-prime edge 
    CGACGTTACG ACGTTTTCAT CCCTATATAC ACATTCTACC CGACCGACGT 
    ATCGGTATAT TCTTCACTCG A

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15810382 [Map]; Strand: c
      • AT4G32780.1 - [+] show detail - phosphoinositide binding
        Distance: 0; Region: intron3 (CDS)
      • AT4G32785.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Plec...
        Distance: -684; Region: promoter
    Flanking Genome Sequence: GT18261 - 5-prime edge 
    TCCTACTTTC TCCCTGCTTG GCGAGGAGTA GTCTAATTGA CTAGTATATA 
    TTATTATATT CTCCAGACAT AACATATTAA TCCGAATCTA AAAATCCAAT 
    AAAACTAGAA CCGAATTCAT GTAACGGGTA GATCTAGCCA AATTGATGTT 
    TGACATTATA TTTGAGTTTT CTCAAATGAA GTCCTTCTTT TTGTCAGCAA 
    TTATTTCGAA CGTAAAAAAA AGTTAACCAT AGAATTTCCG CTCATTGCAC 
    ATTACTCACT GTGTTACCCT TTTTATTATT TCAAAAAGAA AAGGATATGG 
    ATTGAATAAA CAATTGCATG ATTTCATCAT GACAATTATA ATGCTTTCTC 
    TTTTCTCTCG GTTAATTTTT ATAATCAACG AAAAAGTTCC GAAACCAACC 
    AGCTTTTTTT CATTCTTTAC CGTCGACTCA TTTTAATAAA GATATGATTT 
    GATTTGAGAC AATGATAAAC CGGAAACCCC CCGGTTTAAT AGATCATATA 
    TACCT

AT4G32780.1

Model type
Protein coding
Short Description
phosphoinositide binding
Computational Description
phosphoinositide binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF828 (InterPro:IPR008546); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT5G43870.1); Has 405 Blast hits to 233 proteins in 34 species: Archae - 2; Bacteria - 17; Metazoa - 10; Fungi - 2; Plants - 172; Viruses - 6; Other Eukaryotes - 196 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G32785.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: FORKED 1 (TAIR:AT3G63300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR