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Mutant Lines
GT18289

GT18289

CSHL Arabidopsis genetrap mutant lines

Original: GT18289

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18289

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 19681183 [Map]; Strand: w
- AT5G48550.2 - [+] show detail - F-box associated ubiquitination effector family protein
  Distance: 623; Region: intergenic
- AT5G48560.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -2823; Region: intergenic

ATATACTTTT TTTTCTTTTT TCTTTTATGA AATTAGTTGT GGTTAAGTTG 
GATTTGCATG TATGAATATT GAATGCAGTT GTTTACATCT AAAAACACAT 
TGATTGAATA TTGGCCTAAC GAGTAACGAC CCATGTTGGT AAGAAAAATG 
AGGGAATTAG GTTTGGTAAA GTAAAATTTG AAAATTGTAT TGGGGGTTAG 
GTCGTTGGAC ATGACTTCTA TTGCTAGTTT GGTATTTATG GATCAAATCG 
ACAAATACCA AAAACAAATA TGAAAGAATC CTATACACCA AAAGTGGAGG 
AGCTCGAAAT AGCCATAAGA ACTATATTAG CAATAATATT GTCCGCCCTT 
GGAATGAATA CAAAAGAGAT ATAAGCAAAA GAGTTCCAAA GCAAAGCTAA 
ATCATGAATT GTTTGCAAAT TGTGTCTAAG GGTATTAGTA ATGACAATTG 
TGGAATTGTT TTATAAAACT ATATGCTAAA TCTCTTTTGT GTTGCCCCTT 
TGATATAATA GATGAGTAAT GACTGTTGTT GTTTTCCAAT GATAATGCTC 
CAACGTCTGA ATTGTTTTAG AGAACAAATT CAGGCAGAAA CTAATTAAAC 
AACTCGATCC

AT5G48550.2

Model type: Protein coding
Short Description: F-box associated ubiquitination effector family protein
Computational Description: F-box associated ubiquitination effector family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: leaf whorl; CONTAINS InterPro DOMAIN/s: F-box associated interaction domain (InterPro:IPR017451).
Link: InterPro Scan - TAIR

AT5G48560.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G07340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR