Home
Mutant Lines
GT18381

GT18381

CSHL Arabidopsis genetrap mutant lines

Original: GT18381

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18381

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 10784256 [Map]; Strand: w
  - AT4G19870.2 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
    Distance: 0; Region: exon1 (CDS)
  - AT4G19870.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: GT18381 - 3-prime edge
```
TTACGACCGT TTTCATCCCT ATATACACAT TCTACCCGAC CGGATCGTAT 
CGGTATATCA TTCTCACTCG ACAACGGCGA AGAAGACGAA GAGGACGACA 
AATGCTTCGT CACCAACTCC GTCGTCTTCA TCTCCTTCGT TTTCTTCTCT 
CCCAGACGAA ATCGTCGAGA ACTGCTTAGC TCGGATCTCG AGGTCGTACT 
ATCCAACACT CTCAATCGTT TCGAAAAGCT TCCGT
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 10784337 [Map]; Strand: w
- AT4G19870.2 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: -74; Region: promoter
- AT4G19870.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: -81; Region: promoter

CCTACTTTCT CCCTGGTCAA ATGACAAAAA ACAATTCTCA TATGAACACT 
TTTTGGTTTT AGTTTTGTTA ATTGCAAAAC AGCCCCTAAT TAAAATTTTA 
GTTACATAAG AGACCACAAA ATGCTGAGGA AAAGTAGAAT CGAACTCCAA 
GGTTCAAAGG TTACATAAAA GACCCTAATC CGCCACATGA CCTTCGAAGT 
TTCAATGTGA TTGCAGTAAA AACAAACAGT GTTTTCAACC GTGGAGATTG 
CAATAAACTG TAACATATCA AACAGAAAGC TTTTTATTTT TCTCATAACA 
TAAAACTCAA CATCACTTGC AATGTTAAAG ACACGACTTA AGCTTATTTG 
GTAAAGATGG TCCTAACTTT CTGAAGACAG AACTCAACTC ATGTGTCAAA 
GATTTGATCT TTGATGAGAT GTTTTTCATT TGGAGAATCT GTGTCGATCA 
TGAGGCGAAG TGTAATCGAT GTTTGGTCCA TGAGGGATGA TCCCAAAAGG 
GTTGATCGAC GGGTGGCTTC CATAGTAATG CTGCTTGATG T

AT4G19870.1

Model type: Protein coding
Short Description: Galactose oxidase/kelch repeat superfamily protein
Computational Description: Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT4G19865.1); Has 4401 Blast hits to 3517 proteins in 213 species: Archae - 26; Bacteria - 215; Metazoa - 2643; Fungi - 4; Plants - 1258; Viruses - 96; Other Eukaryotes - 159 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G19870.2

Model type: Protein coding
Short Description: Galactose oxidase/kelch repeat superfamily protein
Computational Description: Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT4G19865.1); Has 4399 Blast hits to 3515 proteins in 213 species: Archae - 26; Bacteria - 215; Metazoa - 2641; Fungi - 4; Plants - 1258; Viruses - 96; Other Eukaryotes - 159 (source: NCBI BLink).
Link: InterPro Scan - TAIR