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GT18425

CSHL Arabidopsis genetrap mutant lines

Original: GT18425

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18425

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18435420 [Map]; Strand: w
      • AT5G45500.1 - [+] show detail - RNI-like superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT5G45500.2 - [+] show detail - RNI-like superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT18425 - 3-prime edge 
    TCGACTATTT ATTTCCTTCT CTGGTCTCAT TTATAATTTT GCCTGTTTGG 
    GGAAGAGACC CAGAGAGAGC AGAGTCGCTT CTTCTCCGGA GAAACAGGTT 
    AGAATCGCTT CTCCTCACTC GA

AT5G45500.1

Model type
Protein coding
Short Description
RNI-like superfamily protein
Computational Description
RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G45520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G45500.2

Model type
Protein coding
Short Description
RNI-like superfamily protein
Computational Description
RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G45520.1).
Link
InterPro Scan - TAIR