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GT18427

CSHL Arabidopsis genetrap mutant lines

Original: GT18427

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18427

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23418611 [Map]; Strand: c
      • AT3G63420.1 - [+] show detail - Ggamma-subunit 1
        Distance: 0; Region: exon4 (3UTR)
      • AT3G63420.2 - [+] show detail - Ggamma-subunit 1
        Distance: 0; Region: intron4 (3UTR)
    Flanking Genome Sequence: GT18427 - 5-prime edge 
    ACTTTCTCCC TGATTTCAGC TTCTTTCACA AGATCTAGAA TAAGAAGATG 
    AGAAGCTGTA AGCCTGAAAC TCCATTACTC GTATGTCAGA TCCGGATCCC 
    ATACATTACA TATACATATA ATACTGTTTA CGTAGGTGCA ACTGAGCCGC 
    ACAATCCAAA TCCAATGCCC CTTAATCTGC ACGCTTGGTC GCGGCTACAC 
    CCCCGGGAAG GATCCCCTGC AAAACGAGTT CCCATCAAGA AACTAATCTC 
    CGAACCGCAT AACTCTGTCT AGCGCACCAT ATGAGTGAGG ATCAGCCCCC 
    TTCATCTCCA TTTTAGTTTA ACTAACACAC ACAAGAGCTT AGTATATATG 
    TTTATAGAAT GAAATTGGTT ACTAGGGAAA AGCGTATTGG GGTCCCTTTT 
    TCATCTCACT CGAC

AT3G63420.1

Model type
Protein coding
Short Description
Ggamma-subunit 1
Curator Summary
heterotrimeric G protein gamma-subunit (AGG1) mRNA,
Computational Description
Ggamma-subunit 1 (GG1); FUNCTIONS IN: GTP binding; INVOLVED IN: defense response to fungus, incompatible interaction, acropetal auxin transport, seed germination, lateral root development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: G-protein gamma subunit 2 (TAIR:AT3G22942.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63420.2

Model type
Protein coding
Short Description
Ggamma-subunit 1
Curator Summary
heterotrimeric G protein gamma-subunit (AGG1) mRNA,
Computational Description
Ggamma-subunit 1 (GG1); FUNCTIONS IN: GTP binding; INVOLVED IN: defense response to fungus, incompatible interaction, acropetal auxin transport, seed germination, lateral root development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: G-protein gamma subunit 2 (TAIR:AT3G22942.1); Has 72 Blast hits to 72 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR