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GT18577

CSHL Arabidopsis genetrap mutant lines

Original: GT18577

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18577

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT18577 - 3-prime edge 
    TGACTGTTAC CGACCGTTTT CATCCCTATA TACAATTCTA CCCGACCGGA 
    TCGTATCGGT ATATTCTTCT CTCTCGACC

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT18577 - 5-prime edge 
    AAATCCCGTA CGACCGTTAT CGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3858396 [Map]; Strand: w
      • AT3G12110.1 - [+] show detail - actin-11
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT18577 - 5-prime edge 
    CTTTATCCCT AGTTGGTCGT CCTCGACACC TGGTGTCATG GTTGGTATGG 
    GACAAAAAGA TGCTTACGTT GGTGATGAGG CTCAGTCTAA GAGAGGTATT 
    TTGACATTGA AATATCCTAT TGAGCATGGT ATTGTTAGCA ACTGGGATGA 
    TATGGAGAAG ATTTGGCATC ACACTTTCTA CAATGAGCTC CGTGTTGCAC 
    CTGAAGAACA CCTGTTCTTC TC

AT3G12110.1

Model type
Protein coding
Short Description
actin-11
Curator Summary
Encodes an actin that is expressed predominantly during reproductive development.
Computational Description
actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink).
Link
InterPro Scan - TAIR