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GT18579

CSHL Arabidopsis genetrap mutant lines

Original: GT18579

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18579

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2225894 [Map]; Strand: c
      • AT5G07170.1 - [+] show detail - Cell cycle regulated microtubule associated protein
        Distance: 796; Region: intergenic
      • AT5G07180.1 - [+] show detail - ERECTA-like 2
        Distance: 1677; Region: intergenic
    Flanking Genome Sequence: GT18579 - 5-prime edge
    CCTACTTTCT CTCTGTCGAC GAGCAGTAAT CTTTGATTCA GAGTTTTTGG 
    AATGTGAATG TTTCAATCCT TTCCTACACT TCTTGTAAAT AGAATGTTCA
    AAGATTACTT TTTCATTTGG ATCCTTTTCT ACTGTTGTTA GTTTGTGATT
    TTGAGTTGTG GTGTCTTGTT ATTATGTAGC AGATTATGAA AGATCAAATA
    AAAGACCATT TTACCTGCAA GATGACGAGA TAGTGGTTGC TTTTTTTTGT
    TCTTTATGTT TATTGTTTTG ACTTCTCAGT TTGAGTGGAA TGAACAAGTT
    GAGAGTGAAA CAGAGACTAG TCTCGTCCTC TGTTTCTAAG CAACCACATG
    TACCACAAGG CAAAGATTCC GTGCAACAAA AGGTTTGTTT TCTTATTCAT
    TTAATAAAGG CTAGTTTCCA ACTTCATCCC ATCCCTTTGA GCACATCCCA
    AGTGATGCAT TTGCAGAAAG AAAAAACATA TCAACCACAC TTCTTAGTTA
    ACTTTACTAA ACCATTTGAT TTTGCCAAAG GATATGCTTC AAAGTATCAA
    CCAATGATGG CAGAAATTTC TATCATAAGA AAAGAAATTC AGAAGCTTAA
    CGAGCTGGTC CGAGGTAGAA ACTGAGCTTA ATCAGCTGTT GGTAACAGAT
    GTTTAATTCA TTTTTACAGG TACATTGTTT CCCCCTAGCA CATCTTTCTG
    TGTACTGATG CAGGATTGAA AGTAGTCATT GACTTAACAC TTAGTACTAT
    TGATGAATAT TGGACT

AT5G07170.1

Model type
Protein coding
Short Description
Cell cycle regulated microtubule associated protein
Computational Description
Cell cycle regulated microtubule associated protein; CONTAINS InterPro DOMAIN/s: Cell cycle regulated microtubule associated protein (InterPro:IPR022021); BEST Arabidopsis thaliana protein match is: Cell cycle regulated microtubule associated protein (TAIR:AT5G62240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G07180.1

Model type
Protein coding
Short Description
ERECTA-like 2
Curator Summary
Encodes a receptor-like kinase that, together with ER and ERL1 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is also important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. When heterozygous in an er/erl1 null background, plants are female sterile due to cell division defect in the integuments.
Computational Description
ERECTA-like 2 (ERL2); FUNCTIONS IN: kinase activity; INVOLVED IN: stomatal complex morphogenesis, embryo sac development, ovule development; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ERECTA-like 1 (TAIR:AT5G62230.1); Has 220369 Blast hits to 138160 proteins in 3652 species: Archae - 160; Bacteria - 22012; Metazoa - 72756; Fungi - 10822; Plants - 87289; Viruses - 476; Other Eukaryotes - 26854 (source: NCBI BLink).
Link
InterPro Scan - TAIR