1. Home
  2. Mutant Lines
  3. GT18604

GT18604

CSHL Arabidopsis genetrap mutant lines

Original: GT18604

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18604

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8155228 [Map]; Strand: w
      • AT2G18820.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT18604 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTCCATC TTAAAAAACT 
    CCTTTGCCTC GTGACGGTAT TTTAGAAGCT TCTTCCACAT CCAAGAGCCT 
    AAAGTTGTGT TTGCCTTGAC AGACCAAAAT CAACCGGTGC GAATTAGATT 
    ATTTTGAATC CAGTTAACCC ATAAAGAATG TTTCGCCGAT ACCAACCTCC 
    AAATCAATTT GAAACAACAG ATTTTGTTAG CGTCAACAAG AGACCTTAAA 
    CCTAAACCAC CTTCACTTTT TGGTTTACAC ACATCATGCC ACGCTACCTT 
    TGCCTTGTGA GGATTTAAAT CTGTTCCCGA CCAAAGAAAA GCTGCACTTA 
    TTTGCTCTAT TTCCCTGATA CAAGCTCTTG GTAGACGAAA GGCTGAAATC 
    CAAAATTTGG TTAAGCTTGA AATTACCGAG TTTAAAAGTT GTAGCCTCCC 
    TGCATATGAC AGGAAACGGT TCTTCCAAGA GCTAATACGT GATCGAATTT 
    TCTCAAGAAG TGGCAGACAA TCTGCTAGAG TCATTCTTTT AGGTCATGAG 
    AGGAAGTCCC AAATAGCGAA CAGGTAAAGA GCCTGAATCA AAAGGGAATC 
    TA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8155220 [Map]; Strand: w
      • AT2G18820.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT18604 - 3-prime edge 
    CGACCGTTAC CGACCGTTTT CATCCCTCCA TCTTAAAAAA CTCCTTTGCC 
    TCGTGACGGT ATTTTAGAAG CTTCTTCCAC ATCCAAGAGC CTAAAGTTGT 
    GTTTGCCTTG ACAGACCAAA ATCAACCGGT GCGAATTAGA TTATTTTGAA 
    TCCAGTTAAC CCATAAAGAA TGTTTCGCCG ATACCAACCT CCAAATCAAT 
    TTGAAACAAC AGATTTTGTT AGCGTCAACA AGAGACCTTA AACCTAAACC 
    ACCTTCACTT TTTGGTTTAC ACACATCATG CCACGCTACC TTTGCCTTGT 
    GAGGATTTAA ATCTGTTCCC GACCAAAGAA AAGCTGCACT TATTTGCTCT 
    ATTTCCCTGA TACAAGCTCT TGGTAGACGA AAGGCTGATA TCCAAAATTT 
    GGTTAAACTT GAAATTACCG AATTTAAAAG TTGTAGCCTC CCTGCATATG 
    AC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8155308 [Map]; Strand: w
      • AT2G18820.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT18604 - 5-prime edge 
    CTTTCTCCCT GGTTTTCTGT GGTCCGAAAC CTCGTTTTGG TATGATCATT 
    GGTGTTCCTT GGGTCAGCTT CATGGTTTAC TTGGAGATCG AGGTTTTATT 
    GATCTGGGTA TCTCATCTTC TTGTTCAGCG GCGGAAGCGC TTTCTAGTCA 
    TAGGAGGAGA AGCCATCGCG ATGACATCTT AAATGACATC GAAGAAGAGT 
    TAGAAAAGCT TCTGTGTCGC GGTATTTGCA CAGAACAAGA TAGGTCTCTT 
    TGTCGAAGTA TTGGGGGTCA GTTTAAGGCT AAGTTTTTCT CTCCGGAAAT 
    TTGGCATCAG ATAAGAGAAC AAGGATTAGT TAAGCAATGG CACAAGGCGA 
    TCTGGTTCTC CGGAGCTACG CCTAAATTCA CGTTTATATC TTGGCTTGCT 
    GCTCATGACA GATTAACAAC CGGTGATAAA ATGGCATCTT GGAACAGGGG 
    AATCTCCTCT GTTTGTGTTC TTTGTAATAT CTCAGCTGAG TCAAGAGATC 
    ATC

AT2G18820.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 2.7e-38 P-value blast match to GB:NP_038607 L1 repeat, Tf subfamily, member 9 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR