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GT18627

CSHL Arabidopsis genetrap mutant lines

Original: GT18627

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18627

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21068339 [Map]; Strand: w
      • AT5G51820.1 - [+] show detail - phosphoglucomutase
        Distance: -282; Region: promoter
    Flanking Genome Sequence: GT18627 - 3-prime edge
    ATAACTTTAA TATCAAAACT GTTACTACGT TCCCACTCAA TTTCACTGAT 
    AAAATGAGTA TATGTATATA TAGAAGTAGT TTAAAATCAC ATTTATTTTG
    CGGAAGATCA TGCCATTCCA CGAGCTACCA AAATTATCAG ATCTTTTGTT
    CTTATTGGAG TTTAACGCAT TAGACATTTA ATTTGCAGAA GACCATATGG
    CCATGCTACA AGTACCAACG TTTTTATTCG ACAGACCAAA GAATATACTA
    ATCGAATCAG TGACGTGTAA TAAACCGAGG AGGAGGAAAA AGAAAGTGTA
    AAGATAAGCG AAGCAAGTAC ATGTGGCAGT CCTAGGCTTC CGAGCAACTC
    AATATCTCTT CCCCAGATCC TCCTCTCTCT TCTTCACTCT TTTAACGGAC
    ACTTTTCACT GATCTATTCA CTCACTCAAA TCGCCGCCGG AGCTAAATCA
    ATCAACAATG ACGTCGACCT ACACGAGATT CGATACCGTA TTTCTCTTTT
    CTAGGTTCGC CGGCGCTAAG TATTCGCCGT TATTGCCGTC TCCGTCGTTT
    ACTTTATCTA CTTCG
  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21068518 [Map]; Strand: w
      • AT5G51820.1 - [+] show detail - phosphoglucomutase
        Distance: -461; Region: promoter
    Flanking Genome Sequence: GT18627 - 5-prime edge
    ATCGCGACAC TAAAATATCG CGAATCTTTT TGTGTTGCTA AGACAAGAAG 
    TTGAATGGTG CAAATGGCGA CACTAAAATA TCTCACTAAA ATTCTTGTGA
    TTTTGGTAGC TTGTGGAATA TTAATTTTGG TAGCTTCACA AATTTTCATG
    GGCTCAACAA CCAGTTTCGA CTAGTATCTT GGGCCTCCTC AAACTTATTG
    AAGCCCAAAT TCCTCTCCTG CCAACAACCA ATTTGTCCAC GAGTTAACCG
    AAACCATACC GAGATTAGTA GAGAAAATAA ATCTAGTTAG ACAACTCACA
    CTCCAATATT AAAGACATAA CAATCAACAA CCGACTTTAA AACGATATAA
    TAATATCTAA TACTCAAAAC ATGTAATCTA TCGACAAAAT TCATGCATTC
    CTTCGTCATG ACTTTTAGAC ACAATCCTCA AAATACCAAC CCCACCTCTT
    CTTTGTCCCT TAGCAGCAAG TCAACTCTAG TAGCAAGGCC ATACTTCGTT
    TCCA

AT5G51820.1

Model type
Protein coding
Short Description
phosphoglucomutase
Curator Summary
Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional PGM activity that is required for full development of amyloplasts.
Computational Description
phosphoglucomutase (PGM); FUNCTIONS IN: phosphoglucomutase activity; INVOLVED IN: response to cold, starch biosynthetic process, detection of gravity, carbohydrate metabolic process; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G70730.3); Has 12307 Blast hits to 12296 proteins in 2800 species: Archae - 231; Bacteria - 9586; Metazoa - 483; Fungi - 211; Plants - 168; Viruses - 0; Other Eukaryotes - 1628 (source: NCBI BLink).
Link
InterPro Scan - TAIR