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Mutant Lines
GT18680

GT18680

CSHL Arabidopsis genetrap mutant lines

Original: GT18680

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18680

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 15874339 [Map]; Strand: c
- AT4G32880.1 - [+] show detail - homeobox gene 8
  Distance: -5714; Region: intergenic
- AT4G32890.1 - [+] show detail - GATA transcription factor 9
  Distance: -1131; Region: intergenic

TTTTGGTTTT GATCAGGATT CTATTTTATT TATTTATAAT TATTGATCAG 
TATTCTAGTA AACACAAGTG TGTGATTTTG AAAATCATCA TTTGCTTATT 
GAAGAGCAAT GTTCACTAAT GAACCCAACA CACACATTGA TTCTAGGGTG 
TATTACATGA TTTACATCGT AGATATTACA TCTGAAGGCC GCAAGAAAAA 
TAAAATGCTA TTACATCTGA GATATTGAAG TCTTTAAGAT TTCTAGTCGA 
AGATATTATG CATATATACT TACAAAATTA TTCCATGTGA GTAAGTTGAA 
TGCAACACTA TACTCATTAG GAACCAACAA AGTTGTGATG TTGATGTTAT 
GTACCACTAA AGTGAAGTTT TTCAGGAGGT TCTAATTCAC AATAAACATC 
AAATACGAGG TCGATGTGGA TGCTATAAAA AAGTGTTTTA CGTGGACGAT 
TAAGATCACA TTGATAATGA TGAGAGAAAT TTACCAAACA CTGAGTTCTG 
GTATGGTGAT ATAAAAGATC ATTTTCAGCT CATGTAGAAA ACATAGCTCA 
TGGGGTTGTT AGCTTTTTTG TAACATTAAG TTTTTTCCAA CATCTTCCTC 
ATTTGAGATT TTCTTTTTAA TAATTAGAAA ATCCATAACA CAATTGAGAT 
AATGCGCTCT TCCGTCCCAT CTCGCACCAA ATCTCACTCT ACAATATAGC 
ATCTTTTATG GATCAAACTC GAGTTTTTAT AATATGTTAA ATTTC

5 prime edge [+] show sequence

Chromosome: 1; Position: 28327927 [Map]; Strand: c
- AT1G75460.1 - [+] show detail - ATP-dependent protease La (LON) domain protein
  Distance: 0; Region: exon1 (5UTR)

CCTACTTTCT CCCTGCAGGG GAAGAGACGA AGTAATCAGA GAATACAAAA 
AAGAGGGTTT ATTACATTAT TTGAATATTT CTTTTGCCTT TTGGTGGGTT 
TAAAGAAAAA AAAATTAAGG ATATGATAAT TGACATGTCA TTATAACAGA 
TATTTGAGTG ATTTGTATTT TTGTTGTGTG GATAATAAAC GAGAGGAGAG 
GAAGAAGAAG TGGATGTGAT TCTGAATATC CCACGAGTGA GAGACTTTAT 
ATTATCCATC TACAAAATTC TTGTAATGCC ACGTGCTCTT TAGATTAGGG 
ATTACTGACT AAGAAGGAAT TAGTGACGCA TTTTCTAGAT GAGAATTCTA 
GAGAGAATAA AAATGTGTAG AAGTTAGTTG GAAGAGCATT TGAATGGTGA 
TAGGTGTTGG GTTGATTTAT GACATTTTCC CCTAACTTAT TTCTCCAATC 
TCCAACCAAT TATGTACCAA AAAATCATCA TTAAACCGGT TAGTATAAGC 
TTTGTGCTTG TGGTAAC

AT1G75460.1

Model type: Protein coding
Short Description: ATP-dependent protease La (LON) domain protein
Computational Description: ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); BEST Arabidopsis thaliana protein match is: ATP-dependent protease La (LON) domain protein (TAIR:AT1G19740.1); Has 3715 Blast hits to 3715 proteins in 882 species: Archae - 0; Bacteria - 1742; Metazoa - 186; Fungi - 45; Plants - 112; Viruses - 0; Other Eukaryotes - 1630 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G32880.1

Model type: Protein coding
Short Description: homeobox gene 8
Curator Summary: member of homeodomain-leucine zipper family, acting as a differentiation-promoting transcription factor of the vascular meristems.
Computational Description: homeobox gene 8 (HB-8); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT1G52150.1); Has 3304 Blast hits to 3224 proteins in 267 species: Archae - 0; Bacteria - 6; Metazoa - 860; Fungi - 101; Plants - 2302; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G32890.1

Model type: Protein coding
Short Description: GATA transcription factor 9
Curator Summary: Encodes a member of the GATA factor family of zinc finger transcription factors.
Computational Description: GATA transcription factor 9 (GATA9); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 12 (TAIR:AT5G25830.1); Has 1477 Blast hits to 1442 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 587; Plants - 795; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).
Link: InterPro Scan - TAIR