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GT18702

CSHL Arabidopsis genetrap mutant lines

Original: GT18702

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18702

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 526631 [Map]; Strand: c
      • AT1G02520.1 - [+] show detail - P-glycoprotein 11
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: GT18702 - 3-prime edge 
    GGTAAAGGTA TTTTACCGAC CGTTACCTAC CGTTTTCATC CCTACCCAAA 
    AGTATCACTC ACCCGAATCG CGGCTCTAAA CAAACCCGAG ATCCCGGTTC 
    TTCTTCTAGG AACCGTAGCA GCAGCAATAA ACGGCGCTAT TTTCCCGCTT 
    TTTGGGATTC TGCATCTCTC GACTAATCGA AGCGTTCTTC AAACCAGCTC 
    ATGAGTTAAA GAGAGATTCA AGATTTTGGG CGATCATATT TGTAGCTCTT 
    GGAGTAACTT CGTTGATCGT CTCACCGACT CAAATGTATC TGTTTGCAGT 
    AGCTGGAGGA AAACTGATTC GACGAATTCG GTCAATGTGC TTTGAGAAAG 
    CGGTTCACAT GGAAGTTGCC TGGTTCGATG AGCCACAGAA TTCGAGTGGT 
    ACAATGGGAG CAAGGCTCTC GGCTGATGCA ACTTTGATTA GGGCTCTAGT 
    TGGAGATGCA TTGTCTTTAG CCGTTCAAAA TGTTGCATCT GCTGCGTCTG 
    GATTGATTAT AGCGTTCACT GCGAGTTGGG AACTAGCTCT TATAATCTTA 
    GTGATGCTTC CTCTTATTGG TATCAATGGT TTTGTTCAAG TCAAGTTCAT 
    GAAAGGATTC AGCGCCGACG CAAAGGTTCG TACATCAACC GGTTTGGTTC 
    CATTTTTTTT AGGCTCTGCA AAAATCCTTT G

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 526633 [Map]; Strand: c
      • AT1G02520.1 - [+] show detail - P-glycoprotein 11
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: GT18702 - 3-prime edge 
    GGAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCTCCC TACCCAAAAG 
    TATCACTCAC CCGAATCGCG GCTCTAAACA AACCCGAGAT CCCGGTTCTT 
    CTTCTAGGAA CCGTAGCAGC AGCAATAAAC GGCGCTATTT TCCCGCTTTT 
    TGGGATTCTG ATCTCTCGAC CAATCGAAGC GTTCTTCAAA CCAGCTCATG 
    AGTTAAAGAG AGATTCAAGA TTTTGGGCGA TCATATTTGT AGCTCTTGGA 
    GTAACTTCGT TGATCGTCTC ACCGACTCAA ATGTATCTGT TTGCAGTAGC 
    TGGAGGAAAA CTGATTCGAC GAATTCGGTC AATGTGCTTT GAGAAAGCGG 
    GTCACATGGA AGTTGCCTGG ATCGATGAGC CACAGAATTC GAGTGGTACA 
    ATGGGAGCAA GGCTCTCGGC TGATGCAACT TTGATTAGGC CTCTAGTTGG 
    AGATGCATTG ACTTTAGCCG TGCAAAATGT TGCATCTGCT GCGTCTGGAT 
    TGATTATA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 526484 [Map]; Strand: c
      • AT1G02520.1 - [+] show detail - P-glycoprotein 11
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: GT18702 - 5-prime edge 
    GTCCTGTGGT TAAACCAAGA ACATTCAAAG AATGATGACG GCTACTATTA 
    CCAACCGACG AAGTTCCCTC CATTGACTTT TTCAAATTTG AATTCCGGAA 
    CGACGATCCC GAAGATAGCT CTGATGTTTT AACATCCTTG TTTATCTCTT 
    GTAATCGAAT GAGCTGCGAA TAAGCTCCCT CAGAATCTTT CAACAACTCA 
    GAATGAGAAC CTTTTTCCAC CATTTTTCCG CGGTGAATTA CCGCAATCAT 
    ATCCGCATTT CGGACAGTAC TTAATCGATG AGCGACTATA ACTGTAGTCC 
    GGTTAACCAT CCTCATTCCT AAAGCCTCTT GAACCACTCT TTCGGACTCC 
    GCATCGAGCG CGCTTGTTGC TTCATCCAGA AGCAAAATCC GCGGATCTTT 
    AAGAATAGCT CTCGCAATAG CTATCCTCTG TTTCTGACCT CCCGAGAGCT 
    GAGTACCGTG CTCGCCTACC ATTGTATCTA ACCCCTGAGG TAACTTATCA 
    ATGAACTTCG CCGCATTAGC TAGCTCTGTT GCAGCTTTAA TCTCTTCAAC 
    TGT

AT1G02520.1

Model type
Protein coding
Short Description
P-glycoprotein 11
Computational Description
P-glycoprotein 11 (PGP11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 12 (TAIR:AT1G02530.1); Has 844961 Blast hits to 391444 proteins in 4162 species: Archae - 14749; Bacteria - 659839; Metazoa - 18308; Fungi - 13140; Plants - 9783; Viruses - 35; Other Eukaryotes - 129107 (source: NCBI BLink).
Link
InterPro Scan - TAIR