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GT18705

CSHL Arabidopsis genetrap mutant lines

Original: GT18705

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18705

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26597980 [Map]; Strand: c
      • AT5G66631.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18705 - 5-prime edge 
    AGCTCTCTTC ACCGCAGCCG CTTCATCTCA CTCGACAGCT CTCCACAAAC 
    TCTTAACAAG CAGCTCTTTC GTCTCTCTGT CAGGCATCAG ATTCGAATCT 
    TTCATGTCTT GGAACACTCT GTAAGCAAGC ACTGATCTTT CGCATCTGCA 
    ATACGCTTGA ACTAGAAGCT TTAACATGTA CGGATCAGGT TCAAGACCAA 
    TCTGTCTCAC CATTGAGAAA AGTCTCTCAA CTGTTTGAAT CTCTCCCTGC 
    AATGCAAAGT GGTACATTAA ACCCGAGAAC GTCTGGATAT CAGGAGAAAC 
    TCCTGTCAAC ATCATATCTT CTAGCGTTTC TAAAGCCTCT GCGTTTCTCT 
    TGCATTTTGT TAATGTTCTC AAGAGGGATG AGTACAACAG CATGAGGTTG 
    AAATCAGATA TCGAACCGCA GAGTGTTCTG TCTTCGTTGA AAACCTTGAT 
    GGCTGCTTCC GGTTTCTTTG AAATTCCGTA GAGATCAATG ATCAGCCTGA 
    TGGTGCTGAA TGGTAATTTG ATCCCTTCGA TTCTCACTTT CGAGATGAGC 
    TTATCGACCA GTTCAACTTG GCCATTGCGT GCTAACATAG CCATCATTCT 
    CTCAATCGTA TAGGCGTC

AT5G66631.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR