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GT18771

CSHL Arabidopsis genetrap mutant lines

Original: GT18771

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18771

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4164612 [Map]; Strand: c
      • AT1G12260.1 - [+] show detail - NAC 007
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: GT18771 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGGTACA TATCTTACAT 
    AGTGTGATTG TGAATTAGTT GATTATTTCG ACAGACATAT GATTAGACGT 
    ACTATGCTGA ATATATAAGA GGTTGAATTC AAAATCGAAA GGAATTATCG 
    TCAGACATTT ATTAATTACA AGAATTAGTT GTGTTACATG CTTACATCTA 
    AAGAAATATG TGAAGACTAT TCACATGGTT AGTTATGTAG GTTCGAGATA 
    ATTAATTAAA CTCACTAGTT TAAAGTCATG GACTCATGGT AAATAACTGA 
    ATTTTCAAGA AAGTAAAATC AGTGAAACCC AATTATATAC CGTATGATGG 
    TATATAGTTA ATTGATTTAA TGAGATGCAT AATTTCAGCT TCAAATAGAC 
    TAGATCGATT ATTAAATTTG ATTCTGCTTA TATTTCCATC TAAGTACTAT 
    AACCAAACAA GTAAAGATCA GAAGATGAAG AGGAGTAGTT TTTTTTTTAA 
    AAGAGAGGAT GATCCATCTT AAGAGATTCT TTTTTAGATT ATTGTATAAC 
    ATCTTATGAA AACTTTTAAT CAACTTAACA AAAAAAAACC CCAGCTTGAT 
    CAACTTAGGT CTATTTTATT AAAAAAAGAA ATTTTA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4164504 [Map]; Strand: c
      • AT1G12260.1 - [+] show detail - NAC 007
        Distance: 0; Region: exon2 (5UTR)
    Flanking Genome Sequence: GT18771 - 5-prime edge 
    CTTCTTATGT TCATAATTTC ATGACTTTGT TTTCGATTTG TTTGGTGATT 
    TTCTTATAGG CAGATTATTA ACCGATCAAG AAGACAAACA TGAATTCATT 
    TTCCCACGTC CCTCCGGGTT TTAGATTTCA CCCGACAGAT GAAGAACTTG 
    TAGACTACTA CCTGAGGAAA AAAGTCGCAT CGAAGAGAAT AGAAATTGAT 
    TTCATAAAGG ACATTGATCT TTACAAGATT GAGCCATGGG ACCTTCAAGG 
    TTTGCCCAAT CCCACCATCT CTATCCTTCA TTACTTTGTC TCTATTTCCT 
    AAGGAAAGAT TTTAAAAGTC TTTTTTTATT CGTTTGTGGA AATAGAGTTG 
    TGCAAAATTG GGCATGAAGA GCAGAGTGAT TGGTACTTCT TTAGCCATAA 
    AGACAAGAAG TATCCCACAG GGACTCGAAC CAATAGAGCA ACAAAAGCAG 
    GGTTTTGGAA AGCCACCGGA AGAGATAAGG CTATCTATTT GAGGCATAGT 
    CTAATTGGCA TGAGGAAAAC ACTTGTGTTT TACAAGGGAA GAGCCCCAAA 
    TGGACAAAAG TCTGATTGGA TCATGCACGA ATACCGCTTA GAAACCGATG 
    AAAACGGAAC TCCTCAGGTA TTAATATAAC AACCCTAAAA CATTACTTCT 
    CTATAAAAGT TAGTTGCATG TTTATACTAA ACAATCTCAT TATATGATAG 
    GTGCATATAT GATCTCCTAA AATCATT

AT1G12260.1

Model type
Protein coding
Short Description
NAC 007
Curator Summary
Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.
Computational Description
NAC 007 (NAC007); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: Arabidopsis NAC domain containing protein 26 (TAIR:AT1G62700.1); Has 3158 Blast hits to 3153 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 2; Plants - 3027; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Link
InterPro Scan - TAIR