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GT18780

CSHL Arabidopsis genetrap mutant lines

Original: GT18780

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18780

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 386714 [Map]; Strand: w
      • AT2G01850.1 - [+] show detail - endoxyloglucan transferase A3
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT18780 - 3-prime edge
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAGTTGTGT 
    AGAGAGACAT CGGCTTTGAT GGAAAGTGAC CACCCATTTC CGCAGTACGT
    TTGACCTCTC TAATAGGAAC ATTGTCTACA AAGAATCTGC ATAACCAAAA
    AGAACAACAA TTTCACAACT TTGATCAGTA GTTTAGTACA AACTACATAA
    TTATAACCAA AAAAAACATT TATTTGGATT AAGTAAGTTA GATTCTGTAA
    GCTTAGAAAG ATAACATTAT TGGCATAAAA ATTTGTAGCT TTTGTGAACT
    TAAGTAAAGA TTCTCAACTT GTGAATTGGA CCCCAAACAT ACTCTCTATG
    GGGTCATTGT TGATGCCAAA AAACGAAAGC TGTAAACCAT TTTAGGCGAT
    CACACACACA CTTAAAATTG ACAGGAACAT TACAACCAAA AGCAAATAAT
    GTCCCAAGCA TCACAAAACT TTCCACAAGA AGTAATAAGA ATTAATATCC
    ACCAAAGAAA ATTGAATCAT ATTTTTTCAA CAAAAAGATC GTCCCATCAT
    TAAAACCCCA CTTGGGTTTC CTTAAATAGA AGATCATATT ATTGAATCCA
    TAAAGCTTTT AAATCAAATG GGGTCAATAG CCTAACCTCC TTTAAATTGA
    ACCAAACAAA CAAAGATTAA GAGAGAAT

AT2G01850.1

Model type
Protein coding
Short Description
endoxyloglucan transferase A3
Curator Summary
EXGT-A3 has homology to xyloglucan endotransglucosylases/hydrolases (XTHs). Mutants in this gene show a lesion mimic phenotype associated with leaf maturation and a reduction in the number of tertiary veins. Individual tracheary elements in the mutants are shorter, but phloem transport activity is not severely affected. EXGT-A3 plays a role in xyloglucan degradation in the differentiating tracheary elements of rosette leaves.
Computational Description
endoxyloglucan transferase A3 (EXGT-A3); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: phloem or xylem histogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 28 (TAIR:AT1G14720.1); Has 2101 Blast hits to 2091 proteins in 291 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 449; Plants - 1341; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
Link
InterPro Scan - TAIR