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GT18781

CSHL Arabidopsis genetrap mutant lines

Original: GT18781

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18781

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15437 [Map]; Strand: c
      • AT4G00040.1 - [+] show detail - Chalcone and stilbene synthase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT18781 - 5-prime edge 
    CCTACTTTCT CCCTGCCTGT GTTTGGGGCA GGAACTGCTG CATAGCACAG 
    TGAAGCTCCA TGAAAGGAGA TTCCGACTCT GTAGGGTCTG CTCCGATGAT 
    CAGGGCAGCT GCTCCATCTC CAAAGAGTGC AGCCCCGACT AAGTCGTAAG 
    GACGAGCTTT GTTGGGTGGG CGGAACCCCA GAACGGTAGT CTCAGAGGTG 
    GTGAGCAACA CACGGCTCCC TGGGTTGTTC TCAGCAATGT CTTTGGCCAC 
    GCGCAGCCCA CTCAAACCTC CATAGCATCC AAGAAAATAC AGCATCACTC 
    TCTGAACCTC GTTGCTAAGG CCCAGCTGTG CCGAGAGGTA AAGATCACCT 
    CCGGGCAAAC GGAACTCACT GGAGGAAACG TAGACAAGAT GAGTGATATC 
    TTCCACTGCC CTTCCCCATT CCTTGATGCA AACCAAGCTC GCTTCATATG 
    CCATCTGCAC AACCGCATCG TTTGCAATCT CAAGCCTCTG TTTGATGGTT 
    GGGGAACCCT CGGTTGCTAG TTCAGGGTAT TTGTGCAGCG TCTCCCGTGA 
    CATGACTGTG TAGCGTGTCT TGACAGTTGT GCTTTTGCCT AACATCACCA 
    AGACACACAA ACACGCTTAT CTTTGCACAA GTGCTCAAAG AAAAAAAGTT 
    GTCAAAGAAA GTAGAGGGAA GTTACACAAG TGTTGCAGCT TGTCTTTGAT 
    AGAAAGGTCA TCGCATTTGA TTTCACGGAG ATACTCCTCC ACGAGATTCT 
    CCTGGGGAAA AACATTGCTC GGCAAGGCCT TACCGAGAGC AAGCACTGTC 
    GCCTTCCCCT GATAAGCAAC ACGCTTTTGT TTCTC

AT4G00040.1

Model type
Protein coding
Short Description
Chalcone and stilbene synthase family protein
Computational Description
Chalcone and stilbene synthase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: phenylpropanoid biosynthetic process, biosynthetic process, metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Thiolase-like, subgroup (InterPro:IPR016038), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT1G02050.1); Has 5683 Blast hits to 5679 proteins in 1391 species: Archae - 0; Bacteria - 1882; Metazoa - 0; Fungi - 67; Plants - 3528; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).
Link
InterPro Scan - TAIR