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GT18787

CSHL Arabidopsis genetrap mutant lines

Original: GT18787

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18787

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17530185 [Map]; Strand: w
      • AT4G37250.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18787 - 3-prime edge 
    CGTTACCGAC CGTTTTCATC CCTAGTCACA ATAGTGTGAT GAATGCAATG 
    AGAATGGAGT TGATTTCAGT GATTTTCTTC TTCTTTTGCT CTGTTTTGAG 
    TTCCTCTGCT TTAAACTCTG ATGGGTTGGT TTTGATGAAG TTTAAATCCT 
    CTGTTCNGGT TGATCCTCTG TCTTTATTAC AGACATGGAA TTACAAACAC 
    GAAAGTCCAT GTTCTTGGAG AGGAATCTCT TGTAATAACG ATTCTAAAGT 
    CTTAACTTTG TCTCTTCCCA ATTCTCAGCT TCTTGGTTCG ATTCCTTCTG 
    ATTTGGGTTC TCTCTTAACA CTTCAAAGTC TCGATCTTTC CAATAATTCC 
    TTCAATGGGC CATTACCGGT TTCTTTCTTC AACGCTAGAG AGCTTCGTTT 
    CCTTGANTTC TCTAGTAACA TGATCTCCGG CGAAATCCCT TCCGCAATTG 
    GTGATCTTCA CAATCTTCTA ACCCTAAATC TCTCTGATAA TGCCTTGGCG 
    GGAAAGTTAC CTACAAATTT GGCGTCGTTG AGAAACTTAA CGGTGGTTTC 
    TTTGGAGAAT AATTACTTTT CCGGCGAGAT TCCCGGCGGT TGGAGAGTTG 
    TTGAGTTCTT AGACCTGTCG TCGAATCTGA TCAATGGCTC GCTTCCTCCG 
    G

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17530262 [Map]; Strand: w
      • AT4G37250.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT18787 - 5-prime edge 
    CCTACTTTCT CCCTGATTGT GACAGAGAGA GATATGAAGA AGAGAGAGGG 
    AGAGGTGTGA AGGGAGTTAA AGATAGAGAA AGAGAAAACA GCTCACGTAA 
    CCAAACACTC CACTTCCTGC TCCCTAAATG CTCTCTCTCT CTCTTTCTTT 
    GTGTCTCTGT CTCTCTGCAA AAATATTGCA GAGTTTCTTT AATTCTATAA 
    TCAATACGAC TACACACTTC TGGTNTAACT CGACTATTCA TTTATTATTA 
    TGAAATTGTA CTTTCTTTTT TTCTCTCTCT CTCTCTCTTT CTTTAGTGAG 
    CCGAAGAAAC GAGTAGATAG ATTCTTAGAA TCAGTAAGCT ACAAGACATT 
    TATATCATCT ATAGCTAAAG TTGTAAATTT GACTTTTACA TGATATTCTT 
    CTGTTTTTGG TTCACACAAC CAATATAGCT CGAAGGAATC TAAATCGAAT 
    ATAATGGATG TTTTTGAATT TTAGAAAAAT AAGGGCATGT TCTTGGTTTT 
    TGTTTTTAGA ATATAGTTTC GAATGTCTCT GCTGTTTTCC ATTTTTTGGG 
    GATTTTTTTT TTTTGTTAAG GGAGGTTTAA AAAGTTTTTC CCCCGGAAAA 
    GGGTCCCCAG GGGCGGCTAA TAACAATTGG TTTTAACCCG TGGAATAACA 
    ATTTTTTTGG AAAAAAGAAA ACTTTT

AT4G37250.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G23300.1); Has 127505 Blast hits to 87004 proteins in 3796 species: Archae - 113; Bacteria - 9564; Metazoa - 32249; Fungi - 5071; Plants - 68196; Viruses - 226; Other Eukaryotes - 12086 (source: NCBI BLink).
Link
InterPro Scan - TAIR