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GT18800

CSHL Arabidopsis genetrap mutant lines

Original: GT18800

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18800

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 148928 [Map]; Strand: w
      • AT4G00340.1 - [+] show detail - receptor-like protein kinase 4
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT18800 - 3-prime edge 
    CCGACCGTTA CCGACCGTTT TCATCCCTAC TCTCGGGTGG GTTAATGTTT 
    GGTTGGTGGT GTTGATGATA TTTTCTCGGT GGTGATACTG ATAGACATGG 
    GAAAAAAAGA ACAAAAGCTC TCTTTAACTA TTAGACGTTT GAAATGTGGA 
    GAGAATTTTT GCAAGATAAA ATCTGTAAAA GCTGTGACTT CATACCTCCA 
    AAAAGTAAAT TCATTCAGAA AAAGGTTTTG GAACTATAGT TCCTAACGCC 
    AAAGTTACTA TATTAACCCT CATTCATCAA CACCGGCAGG ATAGGAACTA 
    AAAGAAAGAG AAGGGCAGAA TAGGAATTGA GAAGAGGGAG GTGGCAGTGG 
    CAGACATAAG TGGCTAGAAG TCAAAGCCAT GACATCTTTT TTCTCTTCTT 
    CTTAAATGAT TCCTAACCTT TTTCTTAATT ATTTCTAATT AATTACTTTA 
    TGCAGCAGAC AAAAGGTGTT AATCAAAGAA TCATTTTCTT TTTAATATCT 
    TACACACGAC AAGACTAGTC GCATGTGGAT CAATTTACTA TTTGGAATAT 
    TCAGTTTCTC TTTAGACTAT GGAATTATAC TATATCCATA TCTAATAGAA 
    TCTCTCTCTT TCTTTAACCA ACCAAACAAA CAAAATCATG CTTATTATGA 
    TTCCCCAAAT CA

AT4G00340.1

Model type
Protein coding
Short Description
receptor-like protein kinase 4
Curator Summary
Encodes a receptor-like protein kinase that is expressed in roots.
Computational Description
receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink).
Link
InterPro Scan - TAIR