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GT18804

CSHL Arabidopsis genetrap mutant lines

Original: GT18804

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18804

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2314539 [Map]; Strand: w
      • AT2G05980.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT18804 - 3-prime edge
    ATGAAACGGT AGAGGATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    ATGATCATTG GTGTCCGCTT GGTAGACTGC ATCAACACAT GGGGTCTCGG
    GGAACAATAG ATTTGGGAAT TCCAAATAAT GCGAAAGTTG CTGAGGTGAT
    GAATACTCAT AGAAGAAAGC GTCACAGAGC AGATTTTCTA AATCAAATTG
    AGAGCCAAAT TGAGCTGGCT AGACAAGATA GAAGCACAGA TGGTGATCGC
    TCACTTTGGA AACAAAAGGA AGATACCTTC AAGAGTTCTT TCTCCTCATC
    AAAAACTTGG CAACAAATTA GATCCATAAG CCTACGTTGC GATTGGTATC
    GAGGGGTCTG GTTCTCTACC TCTACCCCGA AATACTCTTT TGTCACTTGG
    CTTGCGTTTC ACAATCGGCT TACGACGAGT GACAAAATCT GCAAATGGAA
    CTCAGGGGCT CGGTATGATT GTGTGTTCTG TGGTGAGGAG TTGGAGACGA
    GGGACCACCT CTTCTTCTCG TGTCCCTACT CCTCTCACGT TTGGTTCTCT
    TTAACAAAAG GTCTCCTTAA TGGCAGGAAC ATCTCGAATT GGAATCTCAT
    CACCCCACAT
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2314948 [Map]; Strand: w
      • AT2G05980.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT18804 - 5-prime edge
    AAAGCTGAAA ACATCTTCTC TATCTCCTGA AGACAAGCTT TTGGTAACCG 
    AAAAACAGAG AGCCAAAAGT TTGTAATACT AGATAGAACT GACTTGATCA
    ATTGTAATCT ACCCGCAAAA GACAAAAACC GGTTGGTCCA GGAGGTTATT
    CGTGCTCTTA TCTTCTCCAT GAGAGGGAGA TAATCCGACT GCGTCATTCT
    CTTGGTGAGT AATGGCAAAC CGAGATATTT AACCGGTAAG GTACCTAACT
    CAAAGGGAAA TTGTTGAAGA ATTGAAGTTT TGGCATTAGG AGATATCCCT
    GCCATGAAGA TG

AT2G05980.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.0e-42 P-value blast match to GB:NP_038607 L1 repeat, Tf subfamily, member 9 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR