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GT18938

CSHL Arabidopsis genetrap mutant lines

Original: GT18938

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18938

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14628568 [Map]; Strand: c
      • AT2G34680.1 - [+] show detail - Outer arm dynein light chain 1 protein
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: GT18938 - 5-prime edge 
    CCTACTTTCG CCTGACAGAA CCAGAAACTC TGTTTGTCTG TGTTCTTGAA 
    TTTAGACAAT CTACTAAAGT CCGTACTTTT TTTATTAGTA AATCCTGTTA 
    TGACCGGACC CAATAAAGTA GAGTAATTGT TACATGCGCG TTCCATTCCA 
    AACAATGTGC GTGGGCCACT TGGTCATTTG ATTCTGTATT TTTACTTCGG 
    AGAAATTTGG ATACAACAAA TAAAGTAGAG AGATTGTGTA TAATGAATAA 
    AGTTTCCTTT TTTTTGTTAA TGATTTGATC ATGCGTCTCT TCTGATTTGA 
    GTTTCTTTTG TATCTGCATA AGTTTGGATT GATTTCACTA TGGAGGAAGT 
    AGCAGCTAAG GTTGAGGAAG AAACTGTGGA AACCAATGTA GATGCAGTGA 
    AAGAGGACAA TGCAACTATA GCTAATGAAA GCAGAAGCCC AGAGAGTGTT 
    TCTGCAGTGT CTGTGGTGTC AAATCGAGCT GCTTCTACTA AAAAGAAACC 
    AGTTATTAGT TCGAATTTAA TAAAGCCAAC TGCGTCTTCT TCATTACGGG 
    TCTCGGGTAC TACGCCTGTG ACTATCAGGA GAAATAGTAC TGGAGGAGTA 
    ACAGAGAATT TAGCTGGTGC CTCTAAGGTT CTGCCTAAGC AAGTGAGTAC 
    TACTGCCTCA CGTACTGATC CG

AT2G34680.1

Model type
Protein coding
Short Description
Outer arm dynein light chain 1 protein
Curator Summary
isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.
Computational Description
AUXIN-INDUCED IN ROOT CULTURES 9 (AIR9); INVOLVED IN: response to auxin stimulus, lateral root morphogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT1G78230.1); Has 5746 Blast hits to 1796 proteins in 310 species: Archae - 0; Bacteria - 1053; Metazoa - 771; Fungi - 422; Plants - 290; Viruses - 42; Other Eukaryotes - 3168 (source: NCBI BLink).
Link
InterPro Scan - TAIR