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GT19012

CSHL Arabidopsis genetrap mutant lines

Original: GT19012

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19012

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4949011 [Map]; Strand: c
      • AT5G15240.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon2 (CDS)
      • AT5G15240.2 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT19012 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAGGTG TGGGTATATT 
    ATCGGTCCCT TATGCCTTAG CATCCGGAGG ATGGCTAAGT TTGATCATAC 
    TTTTCACCGT AGCGATCACA ACTTTCTACT GTGCCATTCT CATTAAGAGA 
    TGTATGGAAA TGGATCCACT TCTTAGATCA TACCCGGACA TTGGCTACAA 
    AGCCTTTGGA AACACAGGAC GTGTTATCGT CTCCATCTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4948944 [Map]; Strand: c
      • AT5G15240.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: intron1 (CDS)
      • AT5G15240.2 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT19012 - 5-prime edge 
    CTACTTTATC CCTGCCCCAC CTAAAAAAAA AAAGTTTGAT CAGACAAATG 
    TCCCAGCCTA ACCCATATGC TAATTACCGT TTTTGGGGTA AACTTTTTCC 
    AAACGTTCTT TTGGTTTTTT TGAAACCCCA ACCCCGGTTT TTATTTGAAA 
    ACCCAACCCC AAAAAAATTT CCGGGGCCCC GTTCCCAAAA AAAAAAAAGG 
    ATTTGATTTT ACCAAAGGGG TTTGTAGCCT TGAAAAAAAA AAAAACCCCA 
    ATTTGAAAAG GGAAAACGGG TTGTTAAGGG GTTAAGGTTT TGTCCAGGGC 
    CCCGTTTTTT TTTTTTCTAA AAAAAAATGG GAATGGCGGG TTCCTTTCTA 
    TTAAATTAAA GGGACGGTTT TTTGTCCGAA AAGGGCCAAG TTGGGCCTAG 
    TTGGGCCAAA CGGGTTCCCA GAAAAAAATT AGTTTTTTTA GAAAAAACAA 
    AGTACCTGGT TGGGTTTTTA ACCAATTAAG TCCACCGATG GCGGCCGGTT 
    TGATAAACCC TTTTTTGGGC CTTTCCCCCT TTTAGGGAAT AAATAATACC 
    AATAGCCTTT GAAAACTTTG CCAAA

AT5G15240.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G28960.1); Has 5045 Blast hits to 4985 proteins in 317 species: Archae - 15; Bacteria - 153; Metazoa - 1796; Fungi - 1055; Plants - 1275; Viruses - 9; Other Eukaryotes - 742 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G15240.2

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G28960.1); Has 3693 Blast hits to 2957 proteins in 241 species: Archae - 0; Bacteria - 44; Metazoa - 1493; Fungi - 511; Plants - 1240; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink).
Link
InterPro Scan - TAIR