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GT19056

CSHL Arabidopsis genetrap mutant lines

Original: GT19056

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19056

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 746057 [Map]; Strand: c
      • AT2G02680.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19056 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAATTA CAGGATGATC 
    AAGGGAAGTC AGTAGAACAC TTTTTCAATC TCAAGACATC CCCTTTCCAT 
    GGTGACAATA CGTCAGTTGA TCATGATCCC GTACTACCTC TGTTTTGGTG 
    CAACAATAAA GAAGCTGATC CAGAGAACGA TTGCGTTATT TGCAAAGCCG 
    AAAAGGTCGG CACAGACTAT TATTACTGTG TCGAGTGTGA TATGAGGTAC 
    CACAAAGAAT GTGTCGAGTC TCCACTTAGG ATCAATTATC CTTCCCACGC 
    CAATCATTCT TTCCAACTTT ACTCTTCCCA GAAAAGATTC TAGTATTGCA 
    T

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 746092 [Map]; Strand: c
      • AT2G02680.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19056 - 3-prime edge 
    AATTACAGGA TGATCAAGGG AAGTCAGTAG AACACTTTTT CAATCTCAAG 
    ACATCCCCTT TCCATGGTGA CAATACGTCA GTTGATCATG ATCCCGTACT 
    ACCTCTGTTT TGGTGCAACA ATAAAGAAGC TGATCCAGAG AACGATTGCG 
    TTATTTGCAA AGCCGAAAAG GTCGGCACAG ACTATTATTA CTGTGTCGAG 
    TGTGATATGA GGTACCACAA AGAATGTGTC GAGTCTCCAC TTAGGATCAA 
    TTATCCTTCC CACGCCAATC ATTCTTTCCA ACTTTACTCT TCCAAGAAAA 
    GATTCAAGTA TTGCATCATG TGCAGAAAAA AAGTAAACGG TCTCGTATAT 
    TATTGTGCTC TTTGTGACAT GTATATGCAT ACGCTTTGTG CCCAGGCGGT 
    AATACCCTTT TTCATAGACC AACCAAAAAG GCATGCCCAT ATCCTCACCC 
    TTTTCCCAAG GCAAGCTTCC TTAACCTGCA ATATTTGTGG TGTACTTGAT 
    G

AT2G02680.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, RanBP2-type (InterPro:IPR001876), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G02690.1); Has 1749 Blast hits to 685 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 10; Plants - 1682; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR