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GT19075

CSHL Arabidopsis genetrap mutant lines

Original: GT19075

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19075

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20693893 [Map]; Strand: w
      • AT1G55420.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19075 - 3-prime edge 
    CGTTCGTTTT CGTTACCGGT ATATCCCGTT TTCGTTCCCG TCCCGCAAGT 
    TAAATATGAA AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCCAAC 
    GGGATCATCC CTATTTACGT GCAAAGGCAA GCAATTGAGG TCCAGTGCAT 
    ACTATTACTA TTGTGCTACT TGCAATTTGG AATTCCACAG AGGTTGTCAC 
    ATCTTTCTGC CGGTGATAAG AAGCTCTTTT CACCCCTCTC ACCCTCTCAC 
    CTTCATCTCA CTCGA

AT1G55420.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
embryo sac development arrest 11 (EDA11); FUNCTIONS IN: zinc ion binding; INVOLVED IN: megagametogenesis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT1G55380.1); Has 31248 Blast hits to 2717 proteins in 273 species: Archae - 49; Bacteria - 26496; Metazoa - 873; Fungi - 230; Plants - 1563; Viruses - 57; Other Eukaryotes - 1980 (source: NCBI BLink).
Link
InterPro Scan - TAIR