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Mutant Lines
GT19080

GT19080

CSHL Arabidopsis genetrap mutant lines

Original: GT19080

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19080

Determination of insertion point(s)

3 prime edge [+] show sequence

Not mapped

CGTTCGTTTT CGTTGCCGGT ATATCCCGTT TTCGTTTCCG TCCCGCAAGT 
TAAATATGAA AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC 
GTTTTCATCC CTATATACAC ATTCCACCCG ACCGGATCGA ATCGGTTTCT 
TATTCCCGCT TTACTACCGT TCGTTTTCGT TGCCGGTATA TCCCGTTTTC 
GTTTCCGTCC CGCAAGTTAA ATATGAAAAT GAAAACGGTA GAGGTATTTT 
ACCGACCGTT ACCGACCGTT TTCATCCCTA TAAACACATT CCACCCGACC 
GGATCGAATC GGTTTCTTCT TCCCGCTCTA ACACCGTTCG TTTTCGTGGC 
CGGAATTCCC CGTTTTCGTT CCCGCCCCGC AAGTTAAATA TGAA

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 3672432 [Map]; Strand: c
  - AT3G11620.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
    Distance: -593; Region: promoter
  - AT3G11620.2 - [+] show detail - alpha/beta-Hydrolases superfamily protein
    Distance: -401; Region: promoter
  - AT3G11620.3 - [+] show detail - alpha/beta-Hydrolases superfamily protein
    Distance: -401; Region: promoter
  - AT3G11620.4 - [+] show detail - alpha/beta-Hydrolases superfamily protein
    Distance: -398; Region: promoter
  - AT3G11630.1 - [+] show detail - Thioredoxin superfamily protein
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: GT19080 - 5-prime edge
```
AACCTATAGG GCTAACTAGT AGGAAGAGAG TGAAATCTAT AACGGGCTAA 
TGAATTCAGA TTTCGATGAC ATCGAATAAG AGAAGTATCG ACATTTAGAT 
AAACTTACGG CCTGGGCTTT GACAGCAAAG CTCCGACGAG AAGTGGAGCT 
GAGGGAAGAG CGTCGAGCAA ATCCGGAGCG GAGAGAAGCA GATGCGGAAG 
GAGAA
```

AT3G11620.1

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2305 (InterPro:IPR019363); Has 334 Blast hits to 332 proteins in 157 species: Archae - 0; Bacteria - 7; Metazoa - 123; Fungi - 108; Plants - 47; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G11620.2

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2305 (InterPro:IPR019363); Has 334 Blast hits to 332 proteins in 157 species: Archae - 0; Bacteria - 7; Metazoa - 123; Fungi - 108; Plants - 47; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G11620.3

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2305 (InterPro:IPR019363); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G11620.4

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2305 (InterPro:IPR019363); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G11630.1

Model type: Protein coding
Short Description: Thioredoxin superfamily protein
Curator Summary: Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues.
Computational Description: Thioredoxin superfamily protein; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1); Has 16794 Blast hits to 16794 proteins in 2739 species: Archae - 621; Bacteria - 10920; Metazoa - 1157; Fungi - 359; Plants - 398; Viruses - 0; Other Eukaryotes - 3339 (source: NCBI BLink).
Link: InterPro Scan - TAIR