1. Home
  2. Mutant Lines
  3. GT19085

GT19085

CSHL Arabidopsis genetrap mutant lines

Original: GT19085

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19085

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24390658 [Map]; Strand: c
      • AT5G60680.1 - [+] show detail - Protein of unknown function, DUF584
        Distance: 3682; Region: intergenic
      • AT5G60690.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
        Distance: -6365; Region: intergenic
    Flanking Genome Sequence: GT19085 - 5-prime edge 
    GTTATGAGAA TGTTGGCTTC TTTACAGAGT TGATGAGCCC ATAGCTTATG 
    GAAGCAAGAG AATAATGTGG AAAATGGGAC ATGTTACAAT AACCCAAATA 
    TTTTGGGCCC ATAAAAGGTC CAATCGTTTG GGTCCACTTT GTCTCTGTGA 
    TAGGCCCCAT GAGTACTTTT AGAGGTAGCT GTCTGGTGTT ATCGAATGTG 
    GAGACCTGAC CTAACCGGGA CCCTTCGTGA TCCCTCATTA TTCCTTTTGT 
    CATTCAACTG AATTCCTTTC CTAACAAAAT TGAATGATTA TTACCAATTT 
    TATTCACATC ACATCTTTAA AATCTTGATG ATGTCTCTGC CCTCTCTTCT 
    CCTTTTGTTT CCTCATGGTA CAACTCTTAG ATCTTTTTTA ATGAAATTTT 
    ATCTTAGTGA GACTGTATTT TACTATTTTA GATAGATTGA AATAGTTTTT 
    ACCTCACCAC ACAATTTGAT TTTAACTGTT CAAAGAATCA AAACCCATGT 
    ATAGGAGAGA CAGAGGATTG GTCCTCCTCT ATTGGTATTG ATAACGACAA 
    CTCGAAGAGT ATTTCTTAAG GCTAACCTAA TTAATGTAGT TGACCGGAGG 
    TTGATGTGGT ACCATTTTAC CCTTTTATAT AAACGTTCCT ACACATTTGA 
    TCA

AT5G60680.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF584
Computational Description
Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT3G45210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60690.1

Model type
Protein coding
Short Description
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary
REVOLUTA regulates meristem initiation at lateral positions. a member of a small homeodomain-leucine zipper family. Has overlapping functions with PHAVOLUTA and PHABULOSA.
Computational Description
REVOLUTA (REV); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT2G34710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR