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GT19097

CSHL Arabidopsis genetrap mutant lines

Original: GT19097

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19097

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24484121 [Map]; Strand: w
      • AT5G60860.1 - [+] show detail - RAB GTPase homolog A1F
        Distance: -501; Region: promoter
    Flanking Genome Sequence: GT19097 - 5-prime edge 
    GAAGGCATGG TTCGATCGGA ACTCGTCCTA ACCGTATTTC GCATTACTAT 
    TTGTATGTAA CAGAGTCTAA TCTCTCTTAA CTTAACAACA CAAATCCCAT 
    AAAAATGGAT AGAACTAGCA AAATAAAAAT CAAAGAATTT TACTGAAGTT 
    ACTGAACTTT ATGATTGTAA TGATCAACAG TATCGTCTTT ACACAAAAAA 
    ATATATGAAG AAGATGATAC ACAACACATT TCATTACACC ATCTGATCCA 
    TCTCCATCTT CAAGAATAAA CTCATTCTTA TTTAGTTTAC AACTATTTTT 
    TGTCTTTTGG GAATCTTATA AATTATTTCG GGGAAATTAA CGGCAATAAA 
    ACAACTTACA CCTACCTATT TGGGACTAAC GAGAAAAAGT ATACTTTAAG 
    AAAAGTGAAA AACTTTAACA AAAGAAAAAA TTCAAATCAG AATCTCTAAC 
    CCGGTAAAAA TGTAAAACCG TTTCCCGGAC CCAAATAAGG ACCT

AT5G60860.1

Model type
Protein coding
Short Description
RAB GTPase homolog A1F
Computational Description
RAB GTPase homolog A1F (RABA1f); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1G (TAIR:AT3G15060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR