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Mutant Lines
GT19150

GT19150

CSHL Arabidopsis genetrap mutant lines

Original: GT19150

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19150

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 2515918 [Map]; Strand: w
- AT3G07880.1 - [+] show detail - Immunoglobulin E-set superfamily protein
  Distance: 95; Region: intergenic
- AT3G07890.1 - [+] show detail - Ypt/Rab-GAP domain of gyp1p superfamily protein
  Distance: 386; Region: intergenic

AAGGTATTTT ACCGACCGTT ACCGACCGAT TTTCATCCCT ACTTTAAAGG 
CATATAAAAT CTATGAATAA AGAAAGGCTC TGCATTTTCT GTGAAGCAAA 
ACCTTCTTCT TTTTTTAACT TTCATCTGGA CTGAGAATCA TTATACATGT 
CAGAATCTGA CACAATCATA TCATCAAACA CATGTTAACG TGGAAGGAGA 
AACAGAGTTG AGAACAAACA CAGACATACT GATTTCCAAC GACATTACTG 
GAAAAATCAA GATCAAGGAT GTAGGAAGTA AATGTCGTTC TTGTTCTAAG 
ATGATCAGAA AACGATTCAC AATTATATGT TCAACGAAAA AAACGGAGAT 
ATGGAGTGAA ACAAACACAA CTTTCTTCTA CCGACAACAT CCTCTCTCAG 
GAGACAACTC TCGCATTCTC CGAGTTTCAA AGCGCAGGCC ATTCTTTACG 
GATGTCAAAG CTGTAGTTGA TCTCCAAGTA GCACTTATTA TCATCATCAA 
GAAACTGAAA CAAGATTGTC GAGTAACTTT TTAAAACCAA CACCAAAGAA 
CTGAATATTA CAGAACTAGA TTATGAAGTT CATAAACCAA CAACCAACCT 
TAGTTCTTGC AGAATATGAT CCTCGAGCAA ACATGCCAGA AGGAGTGGTC 
TCTTCTGGCA TCACGTGGTT GTATGGCTCC AACTGAGGAC TAAAGGTTCC 
AAGCATTTCC TTAGCTCTGT CCACTGTAGC CATTAAAGAA AGGAATTGGA 
TCACATTGTC TCTCAACCAT CGAGAGGACC AATTAATTTA AAACAAACTT 
GTGGTCTATT GTTTTACCTT TG

5 prime edge [+] show sequence

Chromosome: 3; Position: 2515978 [Map]; Strand: w
- AT3G07880.1 - [+] show detail - Immunoglobulin E-set superfamily protein
  Distance: 155; Region: intergenic
- AT3G07890.1 - [+] show detail - Ypt/Rab-GAP domain of gyp1p superfamily protein
  Distance: 326; Region: intergenic

TCCTACTTTA TCCCTGCTTT AAGAGAAGCC AACTATTTTT GAACGCATCT 
TACGACACCA CCAAGTCTTT TTTGCTAATT CTAACCACTT TTAACAATTT 
TGATAAACCG TTAGTTATTT TTCTTTAACC GCCTCGTGTA AACATGATCA 
CCATTCACCA ATGGGGTTTG AATAAAGTGA AACGCGATCC TTGATACAAC 
GTCGCTCTCA TATGGTTGTG TGCATTTGTA TGATTTTTAT TGTGTTTTGA 
TTATTTAAAT TTAGATTATG GAATTCATGG AGACTTCAAA TTTGAACTTC 
CAATAGATTC CAAGTTTTTG TTTTTCTATG TTTATATAAT GCCAAGTTCA 
TCTCACTCGA

AT3G07880.1

Model type: Protein coding
Short Description: Immunoglobulin E-set superfamily protein
Computational Description: SUPERCENTIPEDE1 (SCN1); FUNCTIONS IN: Rho GDP-dissociation inhibitor activity; INVOLVED IN: root epidermal cell differentiation, cell tip growth; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), RHO protein GDP dissociation inhibitor (InterPro:IPR000406); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT1G62450.1); Has 660 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 162; Plants - 120; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G07890.1

Model type: Protein coding
Short Description: Ypt/Rab-GAP domain of gyp1p superfamily protein
Computational Description: Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G37290.1); Has 5103 Blast hits to 5093 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 2600; Fungi - 1061; Plants - 534; Viruses - 0; Other Eukaryotes - 908 (source: NCBI BLink).
Link: InterPro Scan - TAIR