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Mutant Lines
GT19234

GT19234

CSHL Arabidopsis genetrap mutant lines

Original: GT19234

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19234

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 3418377 [Map]; Strand: w
  - AT2G07717.1 - [+] show detail - pseudogene, similar to NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3). (...
    Distance: 0; Region: exon1 (NonCoding)
Flanking Genome Sequence: GT19234 - 3-prime edge
```
AGGGGGTGGA GGGTTTTTAC CGACCGTTAC CGACCGTTTT CATCCCAGGG 
ATGAGAGTAG GATGGGAAAA TCCCGTACCC GACCGGATCG TATCGGTCGT 
ATTCTTGAAT TTGGAATGAA AAGAAGAGTA ATGCTTCCTA GCACAGCACT 
ACCA
```
5 prime edge [+] show sequence
1. Chromosome: 4; Position: 1390800 [Map]; Strand: w
  - AT4G03130.1 - [+] show detail - BRCT domain-containing DNA repair protein
    Distance: -154; Region: promoter
  - AT4G03135.1 - [+] show detail - pre-tRNA
    Distance: -95; Region: promoter
Flanking Genome Sequence: GT19234 - 5-prime edge
```
CCTACTTTAT CCCTGCCCTA GAGGTTCCAT TGGTGCTTTA GTCGAGGTGA 
TTGGCGGGAG AGAGACGAGT ACAGAGCTGT GTCGAATGGT TTTGAAAAGC 
TCAGTTCCGT GAAACGATAT TTTAGTTACT ATATATATTT AATTATGTCA 
AACGATACAT CAAATAGGGC ATTTGGTCTA GTGGTATGAT TCTCG
```

AT4G03130.1

Model type: Protein coding
Short Description: BRCT domain-containing DNA repair protein
Computational Description: BRCT domain-containing DNA repair protein; FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT3G21480.1); Has 343 Blast hits to 316 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 177; Fungi - 46; Plants - 105; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link: InterPro Scan - TAIR