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GT19257

CSHL Arabidopsis genetrap mutant lines

Original: GT19257

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19257

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 11185088 [Map]; Strand: c
      • AT5G29550.1 - [+] show detail - transposable element gene
        Distance: -574; Region: promoter
    Flanking Genome Sequence: GT19257 - 5-prime edge 
    CTTGAACAAG GAATTTTGGG TCCGTCATTT AGCCCAAATC ACGAAAATTC 
    CCGAAAAAGT ACTTAAAGGT CAAAATTTGG AGTCGACAAA AAGTCAATGG 
    AAAAATTCCA TTGTCCTGCT TCTTTCGTCG GAGGGCTGTC TTTGGGCTTT 
    CCGAAAAGGT GTCACATGCC AAGTTTGGCC TCAGGGTCTA AAAGTTATGG 
    AGTCATAAAG TTTTAACCAA AAAAAAAAGG TTAAAAAAAA AAAAGGGGTG 
    CAACCCGGGG ATTTCCCGGG GGGGCCCCCA TCCTAAAACT ACCTCCCCCC 
    AAACCCCCTT AACTGGGGAG TTTTAAGGGG ATCCGGGGCA TTAAGGCTAG 
    AATAATCCCC CCCCTTAGAT TATGGAAGGG AAACAAAAAT TTTCTTTT

AT5G29550.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 7.4e-126 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR