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GT19265

CSHL Arabidopsis genetrap mutant lines

Original: GT19265

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19265

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14617515 [Map]; Strand: w
      • AT2G34680.1 - [+] show detail - Outer arm dynein light chain 1 protein
        Distance: 0; Region: intron35 (CDS)
    Flanking Genome Sequence: GT19265 - 5-prime edge 
    TGTCACACAA CACCTAGATT CCAATTGATT GAGGAACAGA CATTTAAAAA 
    AGAGAATAAA GGATAGTGAA GCTAAGAAAA CAAAACACAG TTAATCTTAC 
    CTCAAACTTC ACTAACCCAG TTTCTAATTT CTGTCTCACT TCCTTAAGAA 
    TATCAGGTTC TGCAAATTAA ACATCACCGT GAAATCCCAT TGGAAAATAG 
    AAAAGAAAAG TAGTCGTGGA AAAGGAAACA GAAATCCCTC TTAAGTCTTA 
    AAGGAACCTA GTAAAGAGTT ACTGTATGTA AAACTGAGGT CATATTTGAG 
    AGACTTGGTG ACTATAGCTA GTACACAGAC ATAACAACAA ACAACAACGA 
    CAATATTCAT GACAATGATG ATCATGATTA TGATTTATGA TGATAACTGG 
    AAAACTTACC AACAGCAACA GGCTCAGTTG ATGCAGAAAC TGGGTGGCCT 
    TGGACACCAT CCTCACGTAT GGGTGTATAT ACAACGACCA GTCTGTATCC 
    GACATCATCC ACATTAGCTT CATACATCCT TCCTGTCTCA CCTACAAAAT 
    TTACCGAATT GAATCAAATC CACAGATGAA AATGGTTGAA ACTTTTCCAG 
    GTATTTGGAT ACAAGACAAC CAAGAATTGA GACTCTTACA AGAAATGGTA 
    AGCATTACTT TTGACAGGAA GGAAATAACA ATGTGACCCA AGTTTTGCCT 
    ACCTGGAATT GAGATGAGAT CAGGGCTTCC AACCATTGAT CTAAGCCATT 
    GGATTTTACT C

AT2G34680.1

Model type
Protein coding
Short Description
Outer arm dynein light chain 1 protein
Curator Summary
isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.
Computational Description
AUXIN-INDUCED IN ROOT CULTURES 9 (AIR9); INVOLVED IN: response to auxin stimulus, lateral root morphogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT1G78230.1); Has 5746 Blast hits to 1796 proteins in 310 species: Archae - 0; Bacteria - 1053; Metazoa - 771; Fungi - 422; Plants - 290; Viruses - 42; Other Eukaryotes - 3168 (source: NCBI BLink).
Link
InterPro Scan - TAIR