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GT19420

CSHL Arabidopsis genetrap mutant lines

Original: GT19420

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19420

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17519556 [Map]; Strand: c
      • AT4G37235.1 - [+] show detail - Uncharacterised protein family (UPF0497)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT19420 - 5-prime edge 
    TTGAAGCAAA TGAAAGAAAC GAAGACAAAA ACGCCGTTGT CGCCGATAGC 
    TTATACCGAT CACATTGCTT CTCTCCGGCG TCCATCAAAA GTACGGCCAC 
    GCTCGCCGTC TAGCATGCAC CTCCCAATCC TGGATGAAAG TAGGATGGGA 
    AAATCCCGTA CC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17519574 [Map]; Strand: w
      • AT4G37235.1 - [+] show detail - Uncharacterised protein family (UPF0497)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT19420 - 5-prime edge 
    GGGAGGTGCA TGCTCGACGG CGAGCGTGGC CGTACTTTTG ATGGACGCCG 
    GAGAGAAGCA ATGTGATCGG TATAAGCTAT CGGCGACAAT GGCGTTTTTG 
    TCTTCGTTTC TTTCATTTGC TTCAACTTTC TTTAATTTTT GTCTTCTTCC 
    TTCTCTAATG TCTCACTAAT TAGGATTTCA TCTCACTCGA CTATAGTTAT 
    ATATTCTTCC TTATGTATTT GTTGTAGAAC ATTTTTTC

AT4G37235.1

Model type
Protein coding
Short Description
Uncharacterised protein family (UPF0497)
Computational Description
Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G50810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR