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GT19529

CSHL Arabidopsis genetrap mutant lines

Original: GT19529

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19529

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28107463 [Map]; Strand: c
      • AT1G74800.1 - [+] show detail - Galactosyltransferase family protein
        Distance: -2351; Region: intergenic
      • AT1G74810.1 - [+] show detail - HCO3- transporter family
        Distance: -1011; Region: intergenic
    Flanking Genome Sequence: GT19529 - 5-prime edge
    CGTACGTAAC TACGAGGATT AATTATTAAA CAAATTCAAG TATTAAAAAA 
    AAATGGACAA TGCATGTTTT TCTTTACTTT TGAATTTTAT TTTTTATGAT
    CACGATTTTA CGTTTGATTC AATTTCTCAT ATTACATGCT ACTATTGACA
    ATATTTATAT TTTTCTTATT ATAACAATAT CGTTTTTCTT TTCTTTTTTT
    AACAATATCT TTTTTTTAAC AATATCTTAT TTTAAACATC TTTAATTTGT
    ATGAACACAA ATAGATACAT GAATATTTCT ATGCGTGTGT TAATTTCCTA
    TTTTTGTGAA ACAATATCAA CGTCTCCGCG AATGCGTTGA ATATAAGTCA
    TGATTTTATA TATTTTTTTA TGGTTTTGAA CCCACATCTG ATATCTAAGT
    GAAGTATAGC ATTCTATAAA ATGTAACTAA ACTTTAGATC ATCGAGTGTT
    ATCATGAGTA ACGTAAATGA AATACTTAAG TTAGATAATT ACATACACAA
    GGGTGGTAAA TCATCTCATT TTGAAAAACA AAAAGGAATT ACAAGAATTG
    AATAATAAAA CCATTAAGTG AGATAAATAC ATGCACATGG GTGGTAGATT
    GCATAATAAA CGCCGTACGA TGGATGAGTA TTAAAAAAAC AATGAAAATG

AT1G74800.1

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT5G62620.1); Has 2254 Blast hits to 2220 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 1612; Fungi - 6; Plants - 579; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G74810.1

Model type
Protein coding
Short Description
HCO3- transporter family
Computational Description
BOR5; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT1G15460.1); Has 2579 Blast hits to 1402 proteins in 194 species: Archae - 0; Bacteria - 4; Metazoa - 1942; Fungi - 299; Plants - 229; Viruses - 2; Other Eukaryotes - 103 (source: NCBI BLink).
Link
InterPro Scan - TAIR