Home
Mutant Lines
GT19548

GT19548

CSHL Arabidopsis genetrap mutant lines

Original: GT19548

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19548

Determination of insertion point(s)

5 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT19548 - 5-prime edge
```
GGGGGGGGGG GGGGGGGGGG
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 24196512 [Map]; Strand: c
- AT1G65120.1 - [+] show detail - Ubiquitin carboxyl-terminal hydrolase-related protein
  Distance: -439; Region: promoter
- AT1G65120.2 - [+] show detail - Ubiquitin carboxyl-terminal hydrolase-related protein
  Distance: -439; Region: promoter
- AT1G65130.1 - [+] show detail - Ubiquitin carboxyl-terminal hydrolase-related protein
  Distance: 0; Region: exon12 (CDS)

ATTTGATGTT GTGGTGATGC CATAGGTTGT TGGCAACTGG AAGAGTGTGG 
TCAAAATTTG TGGAGAAAGG AAGATTCGTT CAGAGGTTCT TTTTTATGAA 
GCTGTTCAAT GATAGAAATG TATTAGTATG GAACTGAAGT TTGTAATCTT 
TTGGTTCATT ACTTGATTTT AGTAATAAAG TACTAATAAG ATAATTGCAA 
CAAAATATAT AAACAATTGT TAACGACTTA AGGTTTTTGC TAATTCTTCT 
CACTCAACAA AAACCAATTT CGATCATCCC ATGACCATCT TTGATCCCGA 
ATTCGAAAAC TTTCACACAA ATTTTTTGTC TTATCTGTTA ATTCACACAT 
TTCTGGGGTG CTTTTTTCTG TTTATTCTGG ATGGTGAAAT TAAATAGAAG 
CTGTTGTGTA ATTTACTCAA AACAATGAAT GCACACAAGA TGTTCGACAG 
AATTCCCCAA TGGAGATATC GAAGAAGAAC TGTTCGAAAA AGAAGACACG 
ACGACTTGGG TTTCTCTTGT CACGTGGATT TCACGTGATA AAAGCTTCAA 
CAACTCTGTT ACGTGGATCA CACGTGATAA ATGCTT

AT1G65120.1

Model type: Protein coding
Short Description: Ubiquitin carboxyl-terminal hydrolase-related protein
Computational Description: Ubiquitin carboxyl-terminal hydrolase-related protein; FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Protein of unknown function DUF627 (InterPro:IPR006866), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Zinc finger, C2H2-type (InterPro:IPR007087), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR:AT1G65110.1); Has 468 Blast hits to 425 proteins in 93 species: Archae - 0; Bacteria - 32; Metazoa - 49; Fungi - 38; Plants - 218; Viruses - 8; Other Eukaryotes - 123 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G65120.2

Model type: Protein coding
Short Description: Ubiquitin carboxyl-terminal hydrolase-related protein
Computational Description: Ubiquitin carboxyl-terminal hydrolase-related protein; FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Zinc finger, C2H2-type (InterPro:IPR007087), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR:AT1G65110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G65130.1

Model type: Protein coding
Short Description: Ubiquitin carboxyl-terminal hydrolase-related protein
Computational Description: Ubiquitin carboxyl-terminal hydrolase-related protein; FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Zinc finger, C2H2-type (InterPro:IPR007087), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR:AT1G65200.1); Has 327 Blast hits to 290 proteins in 68 species: Archae - 0; Bacteria - 15; Metazoa - 27; Fungi - 22; Plants - 225; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
Link: InterPro Scan - TAIR