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Mutant Lines
GT19558

GT19558

CSHL Arabidopsis genetrap mutant lines

Original: GT19558

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19558

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 24196538 [Map]; Strand: c
- AT1G65120.1 - [+] show detail - Ubiquitin carboxyl-terminal hydrolase-related protein
  Distance: -465; Region: promoter
- AT1G65120.2 - [+] show detail - Ubiquitin carboxyl-terminal hydrolase-related protein
  Distance: -465; Region: promoter
- AT1G65130.1 - [+] show detail - Ubiquitin carboxyl-terminal hydrolase-related protein
  Distance: 0; Region: exon12 (CDS)

TTGTGAACTT TGTTGGGTTA AACATATATT GATGTGTGGT GATGCCATAG 
GTTGTTGGCA ACTGGAAGAG TGTGGTCAAA ATTTGTGGAG AAAGGAAGAT 
TCGTTCAGAG GTTCTTTTTT ATGAAGCTGT TCAATGATAG AAATGTATTA 
GTATGGAACT GAAGTTTGTA ATCTTTTGGT TCATTACTTG ATTTTAGTAA 
TAAAGTACTA ATAAGATAAT TGCAACAAAA TATATAAACA ATTGTTAACG 
ACTTAAGGTT TTTGCTAATT CTTCTCACTC GACAAAAACC AATTTCGATC 
ATCCCATGAC CATCTTTGAT CCCGAATTCG AAAACTTTCA CACAAATTTT 
TTGTCTTATC TGTTAATTCA CACATTTCTG GGGTGCTTTT TTCTGTTTAT 
TCTGGATGGT GAAATTAAAT AGAAGCTGTT GTGTAGTTTA CTCAAAACAA 
TGAATGCACA CAAGATGTTC GACAGAATTC CCCAATGGAG ATATCGAAGA 
AGAACTGTTC GAAAAAGAAG ACACGACGAC TTGGGTTTCT CTTGTCACGT 
GGATTTCACG TGATAAAAGC TTCAACAACT CTGTTACGTG GATCACACGT 
GATAAATGCT TCTTCTCTCT

AT1G65120.1

Model type: Protein coding
Short Description: Ubiquitin carboxyl-terminal hydrolase-related protein
Computational Description: Ubiquitin carboxyl-terminal hydrolase-related protein; FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Protein of unknown function DUF627 (InterPro:IPR006866), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Zinc finger, C2H2-type (InterPro:IPR007087), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR:AT1G65110.1); Has 468 Blast hits to 425 proteins in 93 species: Archae - 0; Bacteria - 32; Metazoa - 49; Fungi - 38; Plants - 218; Viruses - 8; Other Eukaryotes - 123 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G65120.2

Model type: Protein coding
Short Description: Ubiquitin carboxyl-terminal hydrolase-related protein
Computational Description: Ubiquitin carboxyl-terminal hydrolase-related protein; FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Zinc finger, C2H2-type (InterPro:IPR007087), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR:AT1G65110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G65130.1

Model type: Protein coding
Short Description: Ubiquitin carboxyl-terminal hydrolase-related protein
Computational Description: Ubiquitin carboxyl-terminal hydrolase-related protein; FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Zinc finger, C2H2-type (InterPro:IPR007087), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR:AT1G65200.1); Has 327 Blast hits to 290 proteins in 68 species: Archae - 0; Bacteria - 15; Metazoa - 27; Fungi - 22; Plants - 225; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
Link: InterPro Scan - TAIR