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GT19569

CSHL Arabidopsis genetrap mutant lines

Original: GT19569

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19569

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT19569 - 5-prime edge 
    GGGGGGGGGG GGGAGGGGGG GGGGGGGGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 248678 [Map]; Strand: c
      • AT4G00580.1 - [+] show detail - COP1-interacting protein-related
        Distance: -35; Region: promoter
    Flanking Genome Sequence: GT19569 - 5-prime edge 
    TCTTCACAAA GACACATTAG CGAACCGGAA TCAGCCATCA GTAAGATTAT 
    TGTAAGAGAA ATGCAAAATA GGGTTTTGAT GAAGTTGAGA AGAAATGAAA 
    CTCCACTCTC TCTGTTTGAG ATTTATAAGC GAGTTTCTTT CGTAGAGGAA 
    TATGAAAAGC TTTATGTTTT TTTTGGGAAA TCAGAAACGC TTAATTACTT 
    GGGAAAACAC AACGTGTAGT AACGATTCTC TCTATTCATC TCCCTTTCCT 
    CTCCCCCCAC TAGGTTTATG ACTCATTGAA AGGGTTTGAC CAGCTAATAA 
    CTTCTTTCTC TATGGGCCAA ATAAGTGGGC CTCACGTTAT ATGAAGACAG 
    AGATTCTCTA AGGAAACCAG GAATACTAGG AATTGTTGAA AAGCAAAGCT 
    ATAAGGCGAG GAAGTTAGCT AAGGGCTTTA TATAGGACAA TGAGTTGGAG 
    CAGATGGATT TGATCAAGAG AGATGCAAGT CTATCTAAGA TTCACTCAAG 
    CAAAGAACCA TAAATTTTCA AAAGACAAGT ACCTGGTGTA GAATCATTGA 
    AGAAACAGCT CCAAGTAATG CCGGTGTAGA ATCATTGATC TAAAGTGAAG 
    TGAAGTTTAT GGTTTTCTCT TCATGAGCTA AAATGAAGTT GCA

AT4G00580.1

Model type
Protein coding
Short Description
COP1-interacting protein-related
Computational Description
COP1-interacting protein-related; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT2G01800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR