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Mutant Lines
GT19608

GT19608

CSHL Arabidopsis genetrap mutant lines

Original: GT19608

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19608

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 24150133 [Map]; Strand: c
- AT5G59980.2 - [+] show detail - Polymerase/histidinol phosphatase-like
  Distance: 350; Region: intergenic
- AT5G59990.1 - [+] show detail - CCT motif family protein
  Distance: 850; Region: intergenic

GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATTTATA 
ATCTAATTGA GAAGCATTAT TCTTCACATT ATTACTAATT ACCTACTTGT 
GAGAAAAATT ATTCTCTTAT TACTAAAGAT GCCTAACATT CAAATTATTT 
TCACTTTTAA ATAAAAATAA ATGATTTTTG TTACTGTTGG AAAATAATAT 
AGTCTTACAA TCAAAGTAAC ATTTTTTCTT GCAAAATATC AAAAGTGCTG 
AGAAACTTTT CCATAGCTTT TTTTTTTGGC AAAAAAAATT GCAAGAAGGT 
TTCCCCCAAC CTTTTTTAAT ATCCGGCCTT ATGAAAATGA AGGTAGGGGT 
TGATTCCTTT AAGTTAGTTA ATTTGAGGGG AACCTTCTTT GATATCTTAA 
AAATTCTAAA GGAAAAAAAA AAATGTTACC CTTGGGAAAT GGCTAGACCT 
TACCCCAATG GGAAACCACC GGGAGAGTTT TTTGAAATCT TCAAAGTACC 
TGGGCCAGGG GTCCATAAAA GGTTTTCCAA GGCAAAAAGT AACCACCTTT 
GACCTTCCAA AAAACTTTTG AAAATCAAGT GGGAAAAAAA AAAATCAAAC 
CTTTAGGGAA CATCCTAACC TATCCTTTAC CTTTTTAAGG GCCCAAATCC 
ATAACCGATG GGAAACCAAT TTGTTTAAGT GGGAGTCCAA AATTTTAAAT 
GGTTTAAGGA AAACCGTTGG CA

5 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT19608 - 5-prime edge
```
GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG
```

5 prime edge [+] show sequence

Chromosome: 5; Position: 24150067 [Map]; Strand: c
- AT5G59980.2 - [+] show detail - Polymerase/histidinol phosphatase-like
  Distance: 284; Region: intergenic
- AT5G59990.1 - [+] show detail - CCT motif family protein
  Distance: 916; Region: intergenic

CCTATAATTA TAAATAAAGT AGTTTTGAAA AAGGAAAGAG AGCAGTCTTT 
CTTCTTTAGC AATGGCTATG GAGGGAGATG TAGGCCCTCC GGCGACATTG 
TCCCCGACTT TTGTCGGCCG GCGGTAGATT TACCGACTCC TCCACTCTTA 
AATCTTTTTA ACTTTTTTTT TCCCTTTTAA AAATTTAAAC AAAAAGCTTT 
TTTTTTGAAC CCGAGTCCCC AAAAAATCAC TTTTGAAAAA AAAATAAAAT 
TCTTTCTTTC CCCCATTTAA AAACCGGTTC AAAAATAAAC CCCCAAAATT 
TGGGGGGGAA TAAATAAAGG GAAAAAATTG GTCTTTATAA AAAGGATCAA 
GCTCTCCAAG GTTTTCTTTT TTACCGGACC CTTTTAAACC TTGATTAAAT 
AAAAAAAGGT TTAAAAGGCC TTATTTGCGG AAAACAAACT CAACTCCTCT 
AACCTGGCGT CTACCCACCT TTAGGGATGG ATAAAACTTT AAACTGAAAT 
CTATCCTCCA AACTTATGTT TAAGGTAAAA TTTGCAAAGG AGAAAACTAA 
AA

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 24149960 [Map]; Strand: c
  - AT5G59980.2 - [+] show detail - Polymerase/histidinol phosphatase-like
    Distance: 177; Region: intergenic
  - AT5G59990.1 - [+] show detail - CCT motif family protein
    Distance: 1023; Region: intergenic
Flanking Genome Sequence: GT19608 - 5-prime edge
```
CTTTTGTTGG GGGGGGGTAG ATTTATCGAG TCCTCCACTC TTAAATCTTT 
TTAACTTTTT TTTTTCCTTT TAAAAATTTT AACAAAAGCC CTTTTTCTT
```

AT5G59980.2

Model type: Protein coding
Short Description: Polymerase/histidinol phosphatase-like
Computational Description: Polymerase/histidinol phosphatase-like; FUNCTIONS IN: tRNA-intron endonuclease activity, ribonuclease activity, catalytic activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: trichome; CONTAINS InterPro DOMAIN/s: Polymerase/histidinol phosphatase-like (InterPro:IPR016195), RNase P subunit p30 (InterPro:IPR002738); Has 1908 Blast hits to 1535 proteins in 339 species: Archae - 16; Bacteria - 381; Metazoa - 491; Fungi - 307; Plants - 100; Viruses - 13; Other Eukaryotes - 600 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G59990.1

Model type: Protein coding
Short Description: CCT motif family protein
Computational Description: CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G41380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR