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GT19614

CSHL Arabidopsis genetrap mutant lines

Original: GT19614

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19614

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18360329 [Map]; Strand: w
      • AT3G49520.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19614 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    AAAGGATAAA CGGAAGAGGC AAACGCGGTC CAAATCTCTC GGTTGTGAAA 
    TCAAAACAGC GTAAATAATC TTCAATGCCT GTTATCAACA AGTGTTCTGT 
    CCCCACTTCT GCCTCTATCG TTACCTCTCG ATCGAAAAAG TAAGCATTTC 
    CCTTCAAAGA CACTCCACTT TGATAAATGA GTTCATCCCT ATAGGGATTA 
    TCATCAAGAA CCGTCCTCCA TGAATCAGAG CTAAAATCGT AGACATCAAT 
    ATGACTTTCG TTTTCCTCGT TCAACCTCAA GATTTTGTGG TTACGGTTGT 
    TGTCGTATCC GAGAGCAAAG CTGTCATCTC TGTGGAATGT GTTTTTGGGT 
    CGAATCCATT TGGTTTGCCC CAAATACGGA TTCCATAACA TAAGACCCGA 
    GTTGTCTTTG GGGATGCATA ACAATAAGCC ATCGCAGTGA TAGACTCGAG 
    ATATCTCGAC TTGATCATCA ATATTAGGTA TGCTTATTTG TTTCATAGAT 
    GGATCAACCA AGTCTTCTTC GTCTTCGATA CGGATTTTTT GGAGATCGAA 
    TCTCAAGGAA CAAACCCTAG AATCTAGAAT CATTAACTCT AGAAACTGAT 
    TCCTTGCTAC TGATTTTTTA CCAAAGATCT GATTTTTTGA TAAAGCGTTC 
    CACGTTTTAC AAGTAGATCG CACTGCTCTA AGAGATGTAA ATGGAACCCA 
    AGAAAATATA TCTTTTACTA AATCATCTGG TAGATCGGAA ATTGTCGTCA 
    TTTCTCCAAG CTTCTACTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18360378 [Map]; Strand: w
      • AT3G49520.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19614 - 5-prime edge 
    TCCTACTTTC TCCCTGTTAT CCTTCCCTCT CCTAGTTTTG AATATTTGGC 
    TCTATCTTGG GCTAGAGATG ATAAGCTTGC TGTGTTATAT AGCCACTACG 
    ACACATTTGA CATCATAGAG ATTTGGATTT CGACTAAGAT TGAGCCCAAT 
    GCGGTTTCGT GGAGCACTTT TTTTAAAGTG GATATGTCAC TAATCAATGG 
    TTTAACGGAT GATTTTTTGA TTAGATTTGA ACCTAAAAGC TTTTTTATCG 
    ACGAGGAGAA GAAAGTCGCT GTACTTTTTG ATACTAAAGT GACAGAGACC 
    TGTCGCTACC AAATGGCTTA CATCGTTGGA GATGATGGAT ACTTCAAATC 
    TGTCAACATT GGAGTAATCT CGAATTCCCA TTGGATAGGA GGCGAACTTG 
    TGCGCTCTTC TTATGTTCCA AGTTTATTGC AACTGCAAGT TTAGTCCATT 
    TTCAATACTG TATTTGTTTC TTGGTTTGAA CGAGACTGCT TTTAGTTTGA 
    AGCAATTGTT GACATTAGTG AAGTAAAGAT CACTTTTTCT AGTTTTTTGT 
    TTGAATATTT CAATCTGAAA CCTTTTTAGA AATTGAAGAT CTTTTTAGAT 
    TTCGGGTATT TGATGTTCTA AACATGGATA ATATCTGCAT CTTGACCAGA 
    GCAAACAAAC AGAGTATATG ATTATGAAAA TTGAATACCT TGTATAACAA 
    GTCACTGAGA TATGAAAATT GCATACCTTA GAAGCTTCTC TAGAAGCTCT 
    CCGATCATCA CTTTTTGATC TCATTTCACC TGTCCAAGAA CAGTGTTTTT 
    CGGTGATTGT AGTATTCGAT CTATAAAAG

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18360385 [Map]; Strand: w
      • AT3G49520.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19614 - 5-prime edge 
    TCTCCCTGGT TATCCTTCCC TCTCCTAGTT TTGAATATTT GGCTCTATCT 
    TGGGCTAGAG ATGATAAGCT TGCTGTGTTA TATAGCCACT ACGACACATT 
    TGACATCATA GAGATTTGGA TTTCGACTAA GATTGAGCCC AATGCGGTTT 
    CGTGGAGCAC TTTTTTTAAA GTGGATATGT CACTAATCAA TGGTTTAACG 
    GATGATTTTT TGATTAGATT TGAACCTAAA AGCTTTTTTA TCGACGAGGA 
    GAAGAAAGTC GCTGTACTTT TTGATACTAA AGTGACAGAG ACCTGTCGCT 
    ACCAAATGGC TTACATCGTT GGAGATGATG GATACTTCAA ATCTGTCAAC 
    ATTGGAGTAA TCTCGAATTC CCATTGGATA GGAGGCGAAC TTGTGCGCTC 
    TTCTTATGTT CCAAGTTTAT TGCAACTGCA AGTTTAGTCC ATTTTCAATA 
    CTGTATTTGT TTCTTGGTTT GAACGAGACT GCTTTTAGTT TGAAGCAATT 
    GTTGACATTA GTGAAGTAAA GATCACTTTT TCTAGTTTTT TGTTTGAATA 
    TTTCAATCTG AAACCTTTTT AGAAATTGAA GATCTTTTTA GATTTCGGGT 
    ATTTGATGTT CTAAACATGG ATAATATCTG CATCTTGACC AGAGCAAACA 
    AACAGAGTAT ATGATTATGA AAATTGAATA CCTTGTATAA CAAGTCACTG 
    AGATATG

AT3G49520.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G49510.1); Has 1137 Blast hits to 1079 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR