Home
Mutant Lines
GT19642

GT19642

CSHL Arabidopsis genetrap mutant lines

Original: GT19642

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19642

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 13509973 [Map]; Strand: w
- AT4G26880.1 - [+] show detail - Stigma-specific Stig1 family protein
  Distance: -1250; Region: intergenic
- AT4G26890.1 - [+] show detail - mitogen-activated protein kinase kinase kinase 16
  Distance: -1866; Region: intergenic

CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTTCACAT 
GCTAGACTTT GAATAATGGA AGCTTCAGAT TTGAAAATTT TAAAACACCC 
TCCTAATGAG AGGTATGTGA TTGACGGAAA AAACAAAAAT GAGAGGTATG 
TGATCAACAA AACTTTTCTT TTTCTTTTGT TTAAATATAT TAAAGAATGT 
TTATACATGC TTCGTATCCG ACTACGAAAG ACTATACTCG TGGTTTGAGT 
ATTAACATGC ACAAAATAGA AAAGTCAGTA TACGTACGGT AATAATTTGT 
AGAGGTCATA ATACAGCCAA TAGAAATGAT GTTGACTTAA TGACGTAAAG 
TTGTGTATTT TTGACGTTAA TAGAAATGAT ATAGTATTTA TAATGTTATA 
TATATATATA TATTTGTATT TATTTATTTA TTTAAAATAC TTAATTAACG 
CACACACGAC CTATTGGAAA CGAGTGGCCA TAGCCCATAC AAAATCGTCA 
ACGATGAAAA TGAGTGAAAA GCTAACAACC ATTTCGTGTC AAGAATCGCG 
TATG

AT4G26880.1

Model type: Protein coding
Short Description: Stigma-specific Stig1 family protein
Computational Description: Stigma-specific Stig1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Stigma-specific protein Stig1 (InterPro:IPR006969); BEST Arabidopsis thaliana protein match is: Stigma-specific Stig1 family protein (TAIR:AT5G55110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G26890.1

Model type: Protein coding
Short Description: mitogen-activated protein kinase kinase kinase 16
Curator Summary: member of MEKK subfamily
Computational Description: mitogen-activated protein kinase kinase kinase 16 (MAPKKK16); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 15 (TAIR:AT5G55090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR