1. Home
  2. Mutant Lines
  3. GT19648

GT19648

CSHL Arabidopsis genetrap mutant lines

Original: GT19648

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19648

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 327643 [Map]; Strand: w
      • AT2G01740.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G01750.1 - [+] show detail - microtubule-associated proteins 70-3
        Distance: -446; Region: promoter
      • AT2G01750.2 - [+] show detail - microtubule-associated proteins 70-3
        Distance: -446; Region: promoter
    Flanking Genome Sequence: GT19648 - 5-prime edge 
    TCCTACTTTC TCCCTGCTTC GCGAATTTAA CTTGCCCTAG TTTACAAACA 
    AACGATACGA CCGAATTGAA TGAAGAACGA TGAGGAGTGT AACCTCTGGA 
    GACTAAGTAA GCTAAGAATT TGAGAGATAG AATGCCGCAA TTGGAATTGA 
    TTAGCTGATG AATATGCTTG TTGCAGGTGA ATGGGTCTGG GAGATTCGAG 
    GATTTTCTCA GGCGAGAAAG AAATTGAAGA GCTTCTCTGA CCATTCATGG 
    ACATGGGTTT CTTCAGAAGA TTCGAAAGGT TACAACTTTG AAAAGATTTT 
    TAAACATCAA AGCTAAATCT AACGGAGAAG GCTTAAACCC TAGAAGGTTA 
    AAGAAGACCG TCGTTCGGTT CTAAACGACA GCGTTTAATT GTAAGCTTAT 
    TATTAAATAA ACATGAAAAT GTAAAAAAAA TCTGAAAACG GTAATTATCT 
    CTCTCTACTC GCTGTGACTT AGCATAAACC TCTTTTAAAT CCTTCTCTAC 
    CAAAAAAAAC TTGCTATTTC TCTTTTGTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 327666 [Map]; Strand: w
      • AT2G01740.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G01750.1 - [+] show detail - microtubule-associated proteins 70-3
        Distance: -423; Region: promoter
      • AT2G01750.2 - [+] show detail - microtubule-associated proteins 70-3
        Distance: -423; Region: promoter
    Flanking Genome Sequence: GT19648 - 5-prime edge 
    GATTTAACTT GCCCTAGTTT ACAAACAAAC GATACGACCG AATTGAATGA 
    AGAACGATGA GGAGTGTAAC CTCTGGAGAC TAAGTAAGCT AAGAATTTGA 
    GAGATAGAAT GCCGCAATTG GAATTGATTA GCTGATGAAT ATGCTTGTTG 
    CAGGTGAATG GGTCTGGGAG ATTCGAGGAT TTTCTCAGGC GAGAAAGAAA 
    TTGAAGAGCT TCTCTGACCA TTCATGGACA TGGGTTTCTT CAGAAGATTC 
    GAAAGGTTAC AACTTTGAAA AGATTTTTAA ACATCAAAGC TAAATCTAAC 
    GGAGAAGGCT TAAACCCTAG AAGGTTAAAG AAGACCGTCG TTCGGTTCTA 
    AACGACAGCG TTTAATTGTA AGCTTATTAT TAAATAAACA TGAAAATGTA 
    AAAAAAATCT GAAAACGGTA ATTATCTCTC TCTACTCGCT GTGACTTAGC 
    ATAAACCTCT TTTAAATCCT TCTCTACCAA AAAAAACTTG CTATTTCTCT 
    TTTGTTTTTG TAGAATCTCC GGTGAAGCCG AATTCAAACC CTAACACTTT 
    TGGTTCATCA GTTCT

AT2G01740.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G02150.1); Has 57588 Blast hits to 14618 proteins in 307 species: Archae - 5; Bacteria - 72; Metazoa - 670; Fungi - 805; Plants - 54302; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01750.1

Model type
Protein coding
Short Description
microtubule-associated proteins 70-3
Curator Summary
Encodes a microtubule associated protein (MAP70-3). Expressed in all tissues.
Computational Description
microtubule-associated proteins 70-3 (MAP70-3); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule, plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-4 (TAIR:AT1G14840.1); Has 32985 Blast hits to 20590 proteins in 1788 species: Archae - 429; Bacteria - 4222; Metazoa - 17320; Fungi - 2752; Plants - 1806; Viruses - 150; Other Eukaryotes - 6306 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01750.2

Model type
Protein coding
Short Description
microtubule-associated proteins 70-3
Curator Summary
Encodes a microtubule associated protein (MAP70-3). Expressed in all tissues.
Computational Description
microtubule-associated proteins 70-3 (MAP70-3); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-4 (TAIR:AT1G14840.1).
Link
InterPro Scan - TAIR